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pin ebdbdf11f7 biology/molsketch: update to 0.7.2 
-This is just a small release to fix some issues with the (possibly) renamed
*.so/*.dll files after removing Qt5 support. In case you were using Molsketch
prior to version 0.7.1, it will ask you to update the corresponding settings at
start up.
For Windows users, there will be an online installer, as in version 0.7.1, but
this will now reside in a separate folder and not be updated as frequently as
Molsketch itself. Updates will instead be made available in the online
repository at github from which the installer will fetch them. Just start the
installer and select the update option
2021-04-04 19:10:20 +00:00
..
ad2vcf biology/ad2vcf: import ad2vcf-0.1.2 2021-03-24 18:19:21 +00:00
arka biology/arka: document 2 instances of char as array index 2020-05-03 14:58:18 +00:00
azara *: recursive bump for libffi 2020-03-08 16:47:24 +00:00
bcftools biology/htslib: Update to 1.12 2021-03-20 18:17:07 +00:00
bedtools biology/bedtools: Update to 2.30.0 2021-02-08 01:49:25 +00:00
biolibc biology/biolibc: import biolibc-0.1.1 2021-03-24 15:20:08 +00:00
bioperl bioperl: update to 1.7.7. 2020-09-06 20:07:47 +00:00
bodr *: Recursive revbump from textproc/icu-68.1 2020-11-05 09:07:25 +00:00
bowtie2 biology/bowtie2: import bowtie2-2.4.2 2021-01-21 17:30:12 +00:00
bwa *: bump PKGREVISION for perl-5.32. 2020-08-31 18:06:29 +00:00
canu *: Recursive revbump from boost-1.75.0 2021-01-01 08:24:33 +00:00
cdhit *: bump PKGREVISION for perl-5.32. 2020-08-31 18:06:29 +00:00
chemical-mime-data chemical-mime-data: comment out dead sites 2017-12-24 09:42:12 +00:00
chemtool *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:17:15 +00:00
clustalw Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
coalesce Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
coordgenlibs *: Recursive revbump from boost-1.75.0 2021-01-01 08:24:33 +00:00
fastDNAml
fastp biology/fastp: document possible array[char] bug 2020-05-25 05:18:35 +00:00
fastqc biology/fastqc: import fastqc-0.11.9 2021-01-20 15:57:17 +00:00
fluctuate Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
gabedit *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:17:15 +00:00
generand biology/generand: import generand-0.1.2 2021-03-21 14:23:46 +00:00
genesplicer
glimmer Sort PLIST files. 2018-01-01 22:29:15 +00:00
gnome-chemistry-utils *: Recursive revbump from textproc/icu-68.1 2020-11-05 09:07:25 +00:00
gp all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
gromacs *: Recursive revbump from textproc/icu-68.1 2020-11-05 09:07:25 +00:00
hisat2 Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
hmmer
htslib biology/htslib: Update to 1.12 2021-03-20 18:17:07 +00:00
igv biology/igv: import igv-2.9.2 2021-02-24 13:54:25 +00:00
kallisto kallisto: remove patches that were removed from distinfo during update 2020-07-30 07:59:19 +00:00
lucy mark packages that fail with -Werror=char-subscripts 2020-05-20 06:09:03 +00:00
maeparser *: Recursive revbump from boost-1.75.0 2021-01-01 08:24:33 +00:00
molsketch biology/molsketch: update to 0.7.2 2021-04-04 19:10:20 +00:00
mopac
mpqc math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
mummer *: bump PKGREVISION for perl-5.32. 2020-08-31 18:06:29 +00:00
ncbi-blast+ Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
nut all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
openbabel openbabel: make buildlink3.mk match Makefile and require eigen3 2021-03-17 18:58:57 +00:00
p5-Bio-ASN1-EntrezGene p5-Bio-ASN1-EntrezGene: update to 1.73. 2020-09-06 19:43:03 +00:00
pdbalign
phylip biology: align variable assignments 2019-11-02 22:09:00 +00:00
plink math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
plinkseq Multiple packages: Replace obsolete maintainer email 2019-01-13 22:06:42 +00:00
primer3 *: Convert broken sourceforge HOMEPAGEs back to http 2020-03-20 11:57:22 +00:00
profit
puzzle biology: align variable assignments 2019-11-02 22:09:00 +00:00
py-biopython math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-cutadapt py-cutadapt: updated to 3.4 2021-03-31 09:23:56 +00:00
py-dnaio (biology/py-dnaio) +BUILD_DEPENDS+= py-setuptools_scm (other than 27 are fixed) 2021-03-04 13:06:34 +00:00
py-mol math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-pydicom py-pydicom: Update to 1.3.0 2019-10-01 14:45:29 +00:00
R-popbio biology/R-popbio: import R-popbio-2.7 2020-08-10 18:18:46 +00:00
rasmol
samtools biology/htslib: Update to 1.12 2021-03-20 18:17:07 +00:00
sewer Sort PLIST files. 2018-01-01 22:29:15 +00:00
stacks Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
stride Comment out dead sites. 2017-09-04 18:00:49 +00:00
trimmomatic biology/trimmomatic: import Trimmomatic-0.38 2018-07-25 15:14:32 +00:00
vcf-split biology/vcf-split: import vcf-split-0.1.1 2021-03-24 15:22:29 +00:00
vcf2hap biology/vcf2hap: import vcf2hap-0.1.2 2021-03-24 18:22:53 +00:00
vsearch Fix portability 2020-03-26 02:37:38 +00:00
xylem all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
Makefile biology/Makefile: Add vcf2hap 2021-03-24 18:23:33 +00:00