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pkgsrc/biology
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rillig b381c6e2f3 Sort PLIST files. 
Unsorted entries in PLIST files have generated a pkglint warning for at
least 12 years. Somewhat more recently, pkglint has learned to sort
PLIST files automatically. Since pkglint 5.4.23, the sorting is only
done in obvious, simple cases. These have been applied by running:

  pkglint -Cnone,PLIST -Wnone,plist-sort -r -F
2018-01-01 22:29:15 +00:00
..
arka Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
azara Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
bioperl bioperl: update to 1.007002. 2017-09-17 07:48:11 +00:00
bodr Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
bwa Re-add patch to bring timeval definition and select prototype into scope. 2017-12-27 23:44:01 +00:00
cdhit Bump PKGREVISION for perl-5.24.0 for everything mentioning perl. 2016-07-09 06:37:46 +00:00
chemical-mime-data chemical-mime-data: comment out dead sites 2017-12-24 09:42:12 +00:00
chemtool transfig: remove, replaced by print/fig2dev 2017-10-03 15:12:42 +00:00
clustalw Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
coalesce Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
fastDNAml Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
fluctuate Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
gabedit Replaced $(ROUND) with ${CURLY} variable references. 2018-01-01 18:16:35 +00:00
genesplicer Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
glimmer Sort PLIST files. 2018-01-01 22:29:15 +00:00
gnome-chemistry-utils Recursive revbump from fonts/harfbuzz 2017-02-12 06:24:36 +00:00
gp Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
gromacs Bump PKGREVISION for perl-5.24.0 for everything mentioning perl. 2016-07-09 06:37:46 +00:00
hmmer Convert all occurrences (353 by my count) of 2017-01-19 18:52:01 +00:00
lucy Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
mopac Fix build. 2015-12-26 22:36:07 +00:00
mpqc Cleanup: replace curly braces with parentheses. 2018-01-01 01:10:13 +00:00
mummer Bump PKGREVISION for perl-5.24.0 for everything mentioning perl. 2016-07-09 06:37:46 +00:00
nut Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
openbabel Recursive revbump from fonts/harfbuzz 2017-02-12 06:24:36 +00:00
p5-Bio-ASN1-EntrezGene p5-Bio-ASN1-EntrezGene: update to 1.72. 2017-09-17 07:51:04 +00:00
pdbalign Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
phylip Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
plink Cleanup: replace curly braces with parentheses. 2018-01-01 01:10:13 +00:00
plinkseq Fixed pkglint warnings. 2016-12-17 12:55:29 +00:00
primer3 Sort PLIST files. 2018-01-01 22:29:15 +00:00
profit Moved documentation to share/doc/${PKGBASE}. Bumped PKGREVISION. 2016-07-24 21:11:52 +00:00
puzzle Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
py-mol Add python-3.6 to incompatible versions. 2017-01-01 14:43:22 +00:00
rasmol Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
sewer Sort PLIST files. 2018-01-01 22:29:15 +00:00
stride Comment out dead sites. 2017-09-04 18:00:49 +00:00
xylem Add SHA512 digests for distfiles for biology category. 2015-11-02 18:42:20 +00:00
Makefile Deleting p5-BioPerl. Duplicate with bioperl. Sorry. 2017-05-10 15:09:47 +00:00