brook at biology dot nmsu dot edu and his team at NMSU. Mummer is a system for aligning whole genome sequences. Using an efficient data structure called a suffix tree, the system is able rapidly to align sequences containing millions of nucleotides whether in complete or draft form. MUMmer can also align incomplete genomes; it handles the 100s or 1000s of contigs from a shotgun sequencing project with ease, and will align them to another set of contigs or a genome using the NUCmer program included with the system.
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231 B
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5 lines
231 B
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$NetBSD: distinfo,v 1.1.1.1 2003/09/27 22:24:57 jschauma Exp $
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SHA1 (MUMmer3.04.tar.gz) = e0f17d535a857bd9b3059d5d0a951621f89041b2
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Size (MUMmer3.04.tar.gz) = 835629 bytes
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SHA1 (patch-aa) = 39253c79e7239365dfdcee46c410f234a23c6df0
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