33 lines
952 B
Makefile
33 lines
952 B
Makefile
# $NetBSD: Makefile,v 1.9 2022/06/30 11:18:04 nia Exp $
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DISTNAME= hisat2-2.2.1
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PKGREVISION= 2
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CATEGORIES= biology
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MASTER_SITES= ${MASTER_SITE_GITHUB:=DaehwanKimLab/}
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GITHUB_TAG= v${PKGVERSION_NOREV}
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MAINTAINER= bacon@NetBSD.org
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HOMEPAGE= https://ccb.jhu.edu/software/hisat2/index.shtml
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COMMENT= Alignment program for mapping next-generation sequencing reads
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LICENSE= gnu-gpl-v3
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# 64-bit code, some assembly language
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ONLY_FOR_PLATFORM= *-*-x86_64
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USE_LANGUAGES= c c++
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USE_TOOLS+= bash gmake perl
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REPLACE_BASH= scripts/*.sh
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REPLACE_PERL= hisat2 scripts/*.sh scripts/*.pl scripts/*.py
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REPLACE_PYTHON= *.py scripts/*.py hisat2-build hisat2-inspect
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PTHREAD_AUTO_VARS= yes
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WRKSRC= ${WRKDIR}/hisat2-2.2.1
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# Unbreak #include <version> on case-insensitive file systems
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post-patch:
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${MV} ${WRKSRC}/VERSION ${WRKSRC}/HISAT2_VERSION
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.include "../../lang/python/application.mk"
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.include "../../mk/pthread.buildlink3.mk"
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.include "../../mk/bsd.pkg.mk"
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