pkgsrc/biology
2020-08-17 20:17:15 +00:00
..
arka biology/arka: document 2 instances of char as array index 2020-05-03 14:58:18 +00:00
azara *: recursive bump for libffi 2020-03-08 16:47:24 +00:00
bcftools biology/bcftools: Upgrade to 1.10.2 2020-07-27 00:29:04 +00:00
bioperl biology: align variable assignments 2019-11-02 22:09:00 +00:00
bodr Revbump for icu 2020-06-02 08:22:31 +00:00
bwa all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
canu biology/canu: fix build on NetBSD-8.0-x86_64 2020-05-16 19:50:21 +00:00
cdhit Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
chemical-mime-data chemical-mime-data: comment out dead sites 2017-12-24 09:42:12 +00:00
chemtool *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:17:15 +00:00
clustalw Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
coalesce Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
fastDNAml
fastp biology/fastp: document possible array[char] bug 2020-05-25 05:18:35 +00:00
fluctuate Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
gabedit *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:17:15 +00:00
genesplicer
glimmer Sort PLIST files. 2018-01-01 22:29:15 +00:00
gnome-chemistry-utils *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:17:15 +00:00
gp all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
gromacs Revbump for icu 2020-06-02 08:22:31 +00:00
hisat2 Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
hmmer Convert all occurrences (353 by my count) of 2017-01-19 18:52:01 +00:00
htslib bioloty/htslib: Correct bl2 (ABI bump, not API) 2020-07-22 15:36:55 +00:00
kallisto kallisto: remove patches that were removed from distinfo during update 2020-07-30 07:59:19 +00:00
lucy mark packages that fail with -Werror=char-subscripts 2020-05-20 06:09:03 +00:00
mopac
mpqc biology: align variable assignments 2019-11-02 22:09:00 +00:00
mummer all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
ncbi-blast+ Revbump for icu 2020-06-02 08:22:31 +00:00
nut all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
openbabel *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:17:15 +00:00
p5-Bio-ASN1-EntrezGene Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
pdbalign
phylip biology: align variable assignments 2019-11-02 22:09:00 +00:00
plink Multiple packages: Replace obsolete maintainer email 2019-01-13 22:06:42 +00:00
plinkseq Multiple packages: Replace obsolete maintainer email 2019-01-13 22:06:42 +00:00
primer3 *: Convert broken sourceforge HOMEPAGEs back to http 2020-03-20 11:57:22 +00:00
profit Moved documentation to share/doc/${PKGBASE}. Bumped PKGREVISION. 2016-07-24 21:11:52 +00:00
puzzle biology: align variable assignments 2019-11-02 22:09:00 +00:00
py-biopython all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
py-mol py-mol: use buildlink for py-numpy 2020-04-27 18:33:18 +00:00
py-pydicom py-pydicom: Update to 1.3.0 2019-10-01 14:45:29 +00:00
R-popbio biology/R-popbio: import R-popbio-2.7 2020-08-10 18:18:46 +00:00
rasmol
samtools biology/samtools: Upgrade to 1.10 2020-07-26 23:30:29 +00:00
sewer Sort PLIST files. 2018-01-01 22:29:15 +00:00
stacks Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
stride Comment out dead sites. 2017-09-04 18:00:49 +00:00
trimmomatic biology/trimmomatic: import Trimmomatic-0.38 2018-07-25 15:14:32 +00:00
vsearch Fix portability 2020-03-26 02:37:38 +00:00
xylem all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
Makefile biology/R-popbio: import R-popbio-2.7 2020-08-10 18:18:46 +00:00