pkgsrc/biology/stride/patches/patch-aa
jschauma d844618851 Initial import of stride, one of the many packages provided by
brook at biology dot nmsu dot edu and his team at NMSU.

Knowledge-based protein secondary structure assignment from atomic
coordinates.
2003-09-27 23:46:55 +00:00

27 lines
1 KiB
Text

$NetBSD: patch-aa,v 1.1.1.1 2003/09/27 23:46:56 jschauma Exp $
--- Makefile.orig 2003-09-27 19:39:02.000000000 -0400
+++ Makefile 2003-09-27 19:39:47.000000000 -0400
@@ -1,18 +1,19 @@
#CC = gcc -O2 # ->> for DJGPP compiler under DOS and for SunOS; also suitable for other machines
-CC = cc -O2
FLAGS = -lm -o
SOURCE = stride.c splitstr.c rdpdb.c initchn.c geometry.c thr2one.c one2thr.c filename.c tolostr.c strutil.c place_h.c hbenergy.c memory.c helix.c sheet.c rdmap.c phipsi.c command.c molscr.c die.c hydrbond.c mergepat.c fillasn.c escape.c p_jrnl.c p_rem.c p_atom.c p_helix.c p_sheet.c p_turn.c p_ssbond.c p_expdta.c p_model.c p_compnd.c report.c nsc.c area.c ssbond.c chk_res.c chk_atom.c turn.c pdbasn.c dssp.c outseq.c chkchain.c elem.c measure.c asngener.c p_endmdl.c stred.c
OBJECT = ${SOURCE:.c=.o}
+all: stride
+
.c.o:
- $(CC) -c $< -o $@
+ $(CC) ${CFLAGS} -c $< -o $@
stride : $(OBJECT)
- $(CC) $(OBJECT) $(FLAGS) stride
+ $(CC) $(OBJECT) ${LDFLAGS} $(FLAGS) stride
$(OBJECT) : stride.h protot.h