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pkgsrc/math
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rillig b037bdefa7 Imported R-genetics from pkgsrc-wip. 
Classes and methods for handling genetic data. Includes classes to
represent genotypes and haplotypes at single markers up to multiple
markers on multiple chromosomes. Function include allele frequencies,
flagging homo/heterozygotes, flagging carriers of certain alleles,
estimating and testing for Hardy-Weinberg disequilibrium, estimating
and testing for linkage disequilibrium, ...
2005-11-04 08:13:15 +00:00
..
abs Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
admesh CONFIGURE_HAS_MANDIR=no 2005-11-01 19:38:43 +00:00
algae Pull out the LS and TR definitions from algae/Makefile and place them 2005-06-17 17:05:18 +00:00
aribas Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
bc Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
blas Cosmetics: use BSD_INSTALL_LIB 2005-09-05 13:22:00 +00:00
blitz++ Changes 0.8: 2005-09-05 14:06:59 +00:00
calc Rework emacs.mk: 2005-08-28 04:25:28 +00:00
calcoo Remove the abuse of buildlink that was pkg-config/buildlink3.mk. That 2005-08-10 20:56:10 +00:00
capc-calc Remove USE_GNU_TOOLS and replace with the correct USE_TOOLS definitions: 2005-05-22 20:07:36 +00:00
cln Remove the abuse of buildlink that was pkg-config/buildlink3.mk. That 2005-08-10 20:56:10 +00:00
dcdflib.c Use INSTALLATION_DIRS to create "include" directory. This broke 2005-08-26 22:22:47 +00:00
dcdflib.f Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
dfftpack Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
djbfft Remove legacy DJB_ERRNO_HACK (replaced with djbware-errno-hack option). 2005-10-05 05:46:54 +00:00
eispack Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
ess Rework emacs.mk: 2005-08-28 04:25:28 +00:00
eukleides Remove USE_GNU_TOOLS and replace with the correct USE_TOOLS definitions: 2005-05-22 20:07:36 +00:00
euler Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
fftpack Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
fftw Add RMD160 checksum. 2005-10-20 18:10:26 +00:00
fftw2 Remove USE_GNU_TOOLS and replace with the correct USE_TOOLS definitions: 2005-05-22 20:07:36 +00:00
fftwf New package fftwf-3.0.1: A single precision library version of math/fftw 2005-10-02 12:06:42 +00:00
galculator Remove the abuse of buildlink that was pkg-config/buildlink3.mk. That 2005-08-10 20:56:10 +00:00
gap Use "+=" instead of "=" with PLIST_SUBST. 2005-10-23 22:27:07 +00:00
gcalctool Update to 5.6.31: 2005-10-16 12:11:19 +00:00
geg Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
glpk Remove USE_GNU_TOOLS and replace with the correct USE_TOOLS definitions: 2005-05-22 20:07:36 +00:00
gnumeric move gnumeric-1.4.3 to math/gnumeric, replacing gnumeric-1.2 2005-09-08 15:29:28 +00:00
gp-autpgrp Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
gp-factint Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
gp-fplsa Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
gp-grape Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
gp-grpconst Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
gp-lag Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
grace Remove USE_GNU_TOOLS and replace with the correct USE_TOOLS definitions: 2005-05-22 20:07:36 +00:00
graphopt Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
grpn Split up patch-ab into one patch per file and converted it from context 2005-10-07 12:31:25 +00:00
gsl Update to 1.7: 2005-09-30 12:31:28 +00:00
gtklife Changes 4.2: 2005-09-07 10:55:31 +00:00
guppi Add patch from Richard Earnshaw in PR 31825: 2005-10-22 13:25:18 +00:00
lapack Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
libffm Add RMD160 checksum. 2005-05-25 12:37:37 +00:00
libmatheval Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
linpack Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
ltm Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
mapm Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
mathomatic Update mathomatic to 12.5.0. 2005-10-29 01:45:35 +00:00
maxima Get rid of USE_PERL5. The new way to express needing the Perl executable 2005-07-16 01:19:06 +00:00
mcsim Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
meschach Fixed a pkglint warning. 2005-10-07 12:32:33 +00:00
metis Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
minpack Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
mpfr Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
mtl Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
newmat Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
ntl Replaced "# defined" with "yes" in Makefile variables like GNU_CONFIGURE, 2005-09-28 20:52:18 +00:00
octave Cosmetics 2005-08-04 13:15:13 +00:00
octave-current This pkg need perl to build. 2005-07-09 18:39:30 +00:00
octave-forge point to octave, not octave-current 2005-10-27 12:15:31 +00:00
odepack Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
otter Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
p5-Math-Base85 This module handles numbers in base 85, via strings and Math::BigInt. 2005-08-13 07:59:41 +00:00
p5-Math-Bezier Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Math-BigInteger Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Math-FFT Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Math-GMP Initial import of p5-Math-GMP-2.04 as version 2.04 into the NetBSD Packages 2005-10-13 10:54:30 +00:00
p5-Math-Interpolate Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Math-MatrixReal Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Math-Pari Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Math-Random Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Number-Compare Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Number-Latin Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Set-Crontab Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Set-Infinite Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Spreadsheet-ParseExcel Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
p5-Spreadsheet-WriteExcel Bump the PKGREVISIONs of all (638) packages that hardcode the locations 2005-08-06 06:19:03 +00:00
pari Changes 2.1.6: 2005-09-08 08:39:59 +00:00
pari-galdata Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
php-bcmath Fixed a pkglint warning. 2005-10-07 12:32:33 +00:00
pspp Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
py-fpconst Removed trailing white-space. 2005-05-23 08:26:03 +00:00
py-numarray remove sitecustomize - this doesn't belong here 2005-10-25 11:18:52 +00:00
py-Numeric Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
py-pytables Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
py-rpy update to 0.4.6 2005-10-21 18:41:14 +00:00
py-Scientific Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
py-Scientific-doc Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
qalculate Changes 0.8.2: 2005-10-11 12:35:06 +00:00
qalculate-bases Utility for conversion between number bases using Qalculate library 2005-10-11 13:26:44 +00:00
qalculate-currency Utility for conversion between currencies using Qalculate library 2005-10-11 13:29:06 +00:00
qalculate-gtk update to 0.8.2.1: fixes ugly cropping in result display 2005-10-20 17:22:32 +00:00
qalculate-kde Changes 0.8.2: 2005-10-11 12:35:06 +00:00
qalculate-units Utility for conversion between units using Qalculate library 2005-10-11 13:29:40 +00:00
quadpack Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
R Added a variable R_HOMEPAGE_BASE that is needed as a replacement for all 2005-11-03 12:00:32 +00:00
R-abind Imported R-abind from pkgsrc-wip. 2005-11-04 08:11:36 +00:00
R-CGIwithR Imported R-CGIwithR from wip. 2005-11-04 07:42:19 +00:00
R-chron Imported R-chron from pkgsrc-wip. 2005-11-04 07:59:58 +00:00
R-clim.pact Imported R-clim.pact from pkgsrc-wip. 2005-11-04 08:12:21 +00:00
R-DAAG Imported R-DAAG from pkgsrc-wip. 2005-11-04 08:04:13 +00:00
R-date Imported R-date from pkgsrc-wip. 2005-11-04 08:12:44 +00:00
R-genetics Imported R-genetics from pkgsrc-wip. 2005-11-04 08:13:15 +00:00
R-GRASS Imported R-GRASS from pkgsrc-wip. 2005-11-04 08:05:09 +00:00
R-ISwR Imported R-ISwR from pkgsrc-wip. 2005-11-04 08:06:15 +00:00
R-Matrix Imported R-Matrix from pkgsrc-wip. 2005-11-04 08:08:01 +00:00
R-PHYLOGR Imported R-PHYLOGR from pkgsrc-wip. 2005-11-04 08:08:52 +00:00
R-R2HTML Imported R-R2HTML from pkgsrc-wip. 2005-11-04 08:09:11 +00:00
R-RArcInfo Imported R-RArcInfo from pkgsrc-wip. 2005-11-04 08:09:31 +00:00
R-Rcmdr Imported R-Rcmdr from pkgsrc-wip. 2005-11-04 08:10:09 +00:00
R-VR Imported R-VR from pkgsrc-wip. 2005-11-04 08:11:12 +00:00
randlib Add RMD160 digests in addition to SHA1 ones. 2005-02-23 12:06:53 +00:00
ruby-bitvector Bump PKGREVISION of packages including ruby extention library 2005-11-02 09:48:33 +00:00
ruby-gsl Bump PKGREVISION of packages including ruby extention library 2005-11-02 09:48:33 +00:00
sc Remove FreeBSD RCS Ids. pkgsrc has diverged too much for syncing to be 2005-03-24 21:12:50 +00:00
scilab - update some buildlink variables which were missed during the last 2005-10-26 04:09:37 +00:00
slatec Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
snns Fix inappropriate uses of ${LOCALBASE} or ${X11PREFIX} instead of 2005-06-17 04:49:45 +00:00
statist Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
superlu Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
tasp-vsipl Regenerate so that the Mac OS X patch program undestands how 2005-07-17 23:02:05 +00:00
tochnog Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
udunits Fix the package configuration of the following packages so that they 2005-08-08 18:13:13 +00:00
vista Massive cleanup of buildlink3.mk and builtin.mk files in pkgsrc. 2005-06-01 18:02:37 +00:00
xeukleides Remove USE_GNU_TOOLS and replace with the correct USE_TOOLS definitions: 2005-05-22 20:07:36 +00:00
xgap Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
xldlas Create directories before installing files into them. 2005-06-17 03:50:19 +00:00
xlife Add some missing man pages to the PLIST. 2005-08-20 19:27:11 +00:00
xlispstat Replaced "# defined" with "yes" in Makefile variables like GNU_CONFIGURE, 2005-09-28 20:52:18 +00:00
xmgr Remove USE_BUILDLINK3 and NO_BUILDLINK; these are no longer used. 2005-04-11 21:44:48 +00:00
yacas update to 1.0.59 2005-10-25 17:55:56 +00:00
yorick Massive cleanup of buildlink3.mk and builtin.mk files in pkgsrc. 2005-06-01 18:02:37 +00:00
Makefile Delete removed ruby related pacakge's entries. 2005-11-03 06:35:30 +00:00