Kallisto is a program for quantifying abundances of transcripts from RNA-Seq data, or more generally of target sequences using high-throughput sequencing reads. It is based on the novel idea of pseudoalignment for rapidly determining the compatibility of reads with targets, without the need for alignment.
10 lines
337 B
Text
10 lines
337 B
Text
@comment $NetBSD: PLIST,v 1.1 2018/12/21 19:00:56 bacon Exp $
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bin/kallisto
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bin/kallisto-test
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share/kallisto/test/README.md
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share/kallisto/test/Snakefile
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share/kallisto/test/chrom.txt
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share/kallisto/test/reads_1.fastq.gz
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share/kallisto/test/reads_2.fastq.gz
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share/kallisto/test/transcripts.fasta.gz
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share/kallisto/test/transcripts.gtf.gz
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