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pin 07999a3e80 biology/molsketch: update to 0.7.1 
Unfortunately, there were quite some unintended bugs in the last version (some
of them older than that, however), which are being addressed by this version.
Saving files and re-opening might have sometimes led to crashes due to
inconsistencies in the drawing's data. This should now be fixed in, if not all
at least most of the cases.
Likewise, copying, cutting, and pasting is more robust now.
The last version prematurely updated some code leading to incompatibilities
with older versions of Qt (especially pre-5.14). These older versions should
now work again; support for Qt 4, on the other hand is completely removed, as
it is doubtful whether that still worked anyway.
Translations should now really work throughout Molsketch (currently supported
languages: Chinese, English, German, Greek).
Finally, for Windows, an installer is provided, which will download from a
repository hosted at github.
2021-03-09 13:54:28 +00:00
..
arka biology/arka: document 2 instances of char as array index 2020-05-03 14:58:18 +00:00
azara *: recursive bump for libffi 2020-03-08 16:47:24 +00:00
bcftools Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
bedtools biology/bedtools: Update to 2.30.0 2021-02-08 01:49:25 +00:00
bioperl bioperl: update to 1.7.7. 2020-09-06 20:07:47 +00:00
bodr *: Recursive revbump from textproc/icu-68.1 2020-11-05 09:07:25 +00:00
bowtie2 biology/bowtie2: import bowtie2-2.4.2 2021-01-21 17:30:12 +00:00
bwa *: bump PKGREVISION for perl-5.32. 2020-08-31 18:06:29 +00:00
canu *: Recursive revbump from boost-1.75.0 2021-01-01 08:24:33 +00:00
cdhit *: bump PKGREVISION for perl-5.32. 2020-08-31 18:06:29 +00:00
chemical-mime-data chemical-mime-data: comment out dead sites 2017-12-24 09:42:12 +00:00
chemtool *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:17:15 +00:00
clustalw Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
coalesce Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
coordgenlibs *: Recursive revbump from boost-1.75.0 2021-01-01 08:24:33 +00:00
fastDNAml
fastp biology/fastp: document possible array[char] bug 2020-05-25 05:18:35 +00:00
fastqc biology/fastqc: import fastqc-0.11.9 2021-01-20 15:57:17 +00:00
fluctuate Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
gabedit *: revbump after fontconfig bl3 changes (libuuid removal) 2020-08-17 20:17:15 +00:00
genesplicer
glimmer Sort PLIST files. 2018-01-01 22:29:15 +00:00
gnome-chemistry-utils *: Recursive revbump from textproc/icu-68.1 2020-11-05 09:07:25 +00:00
gp all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
gromacs *: Recursive revbump from textproc/icu-68.1 2020-11-05 09:07:25 +00:00
hisat2 Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
hmmer Convert all occurrences (353 by my count) of 2017-01-19 18:52:01 +00:00
htslib *: bump PKGREVISION for perl-5.32. 2020-08-31 18:06:29 +00:00
igv biology/igv: import igv-2.9.2 2021-02-24 13:54:25 +00:00
kallisto kallisto: remove patches that were removed from distinfo during update 2020-07-30 07:59:19 +00:00
lucy mark packages that fail with -Werror=char-subscripts 2020-05-20 06:09:03 +00:00
maeparser *: Recursive revbump from boost-1.75.0 2021-01-01 08:24:33 +00:00
molsketch biology/molsketch: update to 0.7.1 2021-03-09 13:54:28 +00:00
mopac
mpqc math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
mummer *: bump PKGREVISION for perl-5.32. 2020-08-31 18:06:29 +00:00
ncbi-blast+ Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
nut all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
openbabel *: Recursive revbump from boost-1.75.0 2021-01-01 08:24:33 +00:00
p5-Bio-ASN1-EntrezGene p5-Bio-ASN1-EntrezGene: update to 1.73. 2020-09-06 19:43:03 +00:00
pdbalign
phylip biology: align variable assignments 2019-11-02 22:09:00 +00:00
plink math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
plinkseq Multiple packages: Replace obsolete maintainer email 2019-01-13 22:06:42 +00:00
primer3 *: Convert broken sourceforge HOMEPAGEs back to http 2020-03-20 11:57:22 +00:00
profit
puzzle biology: align variable assignments 2019-11-02 22:09:00 +00:00
py-biopython math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-cutadapt py-cutadapt: updated to 3.3 2021-03-08 07:10:56 +00:00
py-dnaio (biology/py-dnaio) +BUILD_DEPENDS+= py-setuptools_scm (other than 27 are fixed) 2021-03-04 13:06:34 +00:00
py-mol math/blas, math/lapack: Install interchangeable BLAS system 2020-10-12 21:51:57 +00:00
py-pydicom py-pydicom: Update to 1.3.0 2019-10-01 14:45:29 +00:00
R-popbio biology/R-popbio: import R-popbio-2.7 2020-08-10 18:18:46 +00:00
rasmol
samtools Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
sewer Sort PLIST files. 2018-01-01 22:29:15 +00:00
stacks Revbump packages with a runtime Python dep but no version prefix. 2020-12-04 20:44:57 +00:00
stride Comment out dead sites. 2017-09-04 18:00:49 +00:00
trimmomatic biology/trimmomatic: import Trimmomatic-0.38 2018-07-25 15:14:32 +00:00
vsearch Fix portability 2020-03-26 02:37:38 +00:00
xylem all: migrate homepages from http to https 2020-01-26 17:30:40 +00:00
Makefile biology/Makefile: + igv 2021-02-24 14:05:25 +00:00