20bf40599b
brook at biology dot nmsu dot edu and his team at NMSU. HMMER is an implementation of profile HMM methods for sensitive database searches using multiple sequence alignments as queries. HMMER takes multiple sequence alignement as input and builds statistical model called "Hidden Markov Model" which can be used as a query into a sequence database to find and/or align additional homologues of the sequence family.
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393 B
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20 lines
393 B
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@comment $NetBSD: PLIST,v 1.1.1.1 2003/09/26 03:52:47 jschauma Exp $
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bin/hmmalign
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bin/hmmbuild
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bin/hmmcalibrate
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bin/hmmconvert
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bin/hmmemit
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bin/hmmfetch
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bin/hmmindex
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bin/hmmpfam
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bin/hmmsearch
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man/man1/hmmalign.1
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man/man1/hmmbuild.1
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man/man1/hmmcalibrate.1
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man/man1/hmmconvert.1
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man/man1/hmmemit.1
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man/man1/hmmer.1
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man/man1/hmmfetch.1
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man/man1/hmmindex.1
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man/man1/hmmpfam.1
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man/man1/hmmsearch.1
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