fd5312441e
Replaced TBB with C++ threads Support for Apple M1 Several other fixes and enhancements Changes: https://github.com/BenLangmead/bowtie2/tags
44 lines
1.7 KiB
Text
44 lines
1.7 KiB
Text
@comment $NetBSD: PLIST,v 1.2 2021/12/17 15:25:20 bacon Exp $
|
|
bin/bowtie2
|
|
bin/bowtie2-align-l
|
|
bin/bowtie2-align-s
|
|
bin/bowtie2-build
|
|
bin/bowtie2-build-l
|
|
bin/bowtie2-build-s
|
|
bin/bowtie2-inspect
|
|
bin/bowtie2-inspect-l
|
|
bin/bowtie2-inspect-s
|
|
share/bowtie2/scripts/bowtie2-hbb.sh
|
|
share/bowtie2/scripts/convert_quals.pl
|
|
share/bowtie2/scripts/gen_2b_occ_lookup.pl
|
|
share/bowtie2/scripts/gen_occ_lookup.pl
|
|
share/bowtie2/scripts/gen_solqual_lookup.pl
|
|
share/bowtie2/scripts/infer_fraglen.pl
|
|
share/bowtie2/scripts/make_a_thaliana_tair.sh
|
|
share/bowtie2/scripts/make_b_taurus_UMD3.sh
|
|
share/bowtie2/scripts/make_c_elegans.sh
|
|
share/bowtie2/scripts/make_canFam2.sh
|
|
share/bowtie2/scripts/make_d_melanogaster.sh
|
|
share/bowtie2/scripts/make_e_coli.sh
|
|
share/bowtie2/scripts/make_h_sapiens_ncbi36.sh
|
|
share/bowtie2/scripts/make_h_sapiens_ncbi37.sh
|
|
share/bowtie2/scripts/make_hg18.sh
|
|
share/bowtie2/scripts/make_hg19.sh
|
|
share/bowtie2/scripts/make_m_musculus_ncbi37.sh
|
|
share/bowtie2/scripts/make_mm10.sh
|
|
share/bowtie2/scripts/make_mm9.sh
|
|
share/bowtie2/scripts/make_rn4.sh
|
|
share/bowtie2/scripts/make_s_cerevisiae.sh
|
|
share/examples/bowtie2/index/lambda_virus.1.bt2
|
|
share/examples/bowtie2/index/lambda_virus.2.bt2
|
|
share/examples/bowtie2/index/lambda_virus.3.bt2
|
|
share/examples/bowtie2/index/lambda_virus.4.bt2
|
|
share/examples/bowtie2/index/lambda_virus.rev.1.bt2
|
|
share/examples/bowtie2/index/lambda_virus.rev.2.bt2
|
|
share/examples/bowtie2/reads/combined_reads.bam
|
|
share/examples/bowtie2/reads/conversion_utilities.sh
|
|
share/examples/bowtie2/reads/longreads.fq
|
|
share/examples/bowtie2/reads/reads_1.fq
|
|
share/examples/bowtie2/reads/reads_2.fq
|
|
share/examples/bowtie2/reads/simulate.pl
|
|
share/examples/bowtie2/reference/lambda_virus.fa
|