| .. |
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ad2vcf
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biology/ad2vcf: import ad2vcf-0.1.2
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2021-03-24 18:19:21 +00:00 |
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arka
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biology/arka: document 2 instances of char as array index
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2020-05-03 14:58:18 +00:00 |
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azara
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*: recursive bump for libffi
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2020-03-08 16:47:24 +00:00 |
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bcftools
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biology/htslib: Update to 1.12
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2021-03-20 18:17:07 +00:00 |
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bedtools
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biology/bedtools: Update to 2.30.0
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2021-02-08 01:49:25 +00:00 |
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biolibc
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biology/biolibc: import biolibc-0.1.1
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2021-03-24 15:20:08 +00:00 |
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bioperl
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bioperl: update to 1.7.7.
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2020-09-06 20:07:47 +00:00 |
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bodr
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revbump for textproc/icu
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2021-04-21 11:40:12 +00:00 |
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bowtie2
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biology/bowtie2: import bowtie2-2.4.2
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2021-01-21 17:30:12 +00:00 |
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bwa
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*: bump PKGREVISION for perl-5.32.
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2020-08-31 18:06:29 +00:00 |
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canu
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revbump for boost-libs
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2021-04-21 13:24:06 +00:00 |
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cdhit
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*: bump PKGREVISION for perl-5.32.
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2020-08-31 18:06:29 +00:00 |
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chemical-mime-data
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chemical-mime-data: comment out dead sites
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2017-12-24 09:42:12 +00:00 |
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chemtool
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*: revbump after fontconfig bl3 changes (libuuid removal)
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2020-08-17 20:17:15 +00:00 |
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clustalw
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coalesce
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*: remove dead download locations
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2021-04-21 09:12:23 +00:00 |
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coordgenlibs
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revbump for boost-libs
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2021-04-21 13:24:06 +00:00 |
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fastDNAml
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*: remove dead download location
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2021-04-21 09:11:13 +00:00 |
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fastp
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biology/fastp: document possible array[char] bug
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2020-05-25 05:18:35 +00:00 |
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fastqc
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biology/fastqc: import fastqc-0.11.9
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2021-01-20 15:57:17 +00:00 |
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fluctuate
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gabedit
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*: revbump after fontconfig bl3 changes (libuuid removal)
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2020-08-17 20:17:15 +00:00 |
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generand
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biology/generand: import generand-0.1.2
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2021-03-21 14:23:46 +00:00 |
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genesplicer
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glimmer
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Sort PLIST files.
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2018-01-01 22:29:15 +00:00 |
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gnome-chemistry-utils
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revbump for textproc/icu
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2021-04-21 11:40:12 +00:00 |
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gp
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all: migrate homepages from http to https
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2020-01-26 17:30:40 +00:00 |
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gromacs
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revbump for textproc/icu
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2021-04-21 11:40:12 +00:00 |
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hisat2
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Revbump packages with a runtime Python dep but no version prefix.
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2020-12-04 20:44:57 +00:00 |
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hmmer
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htslib
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revbump for boost-libs
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2021-04-21 13:24:06 +00:00 |
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igv
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biology/igv: import igv-2.9.2
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2021-02-24 13:54:25 +00:00 |
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kallisto
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kallisto: remove patches that were removed from distinfo during update
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2020-07-30 07:59:19 +00:00 |
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lucy
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mark packages that fail with -Werror=char-subscripts
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2020-05-20 06:09:03 +00:00 |
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maeparser
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revbump for boost-libs
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2021-04-21 13:24:06 +00:00 |
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molsketch
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revbump for textproc/icu
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2021-04-21 11:40:12 +00:00 |
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mopac
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mpqc
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math/blas, math/lapack: Install interchangeable BLAS system
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2020-10-12 21:51:57 +00:00 |
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mummer
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*: bump PKGREVISION for perl-5.32.
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2020-08-31 18:06:29 +00:00 |
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ncbi-blast+
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revbump for boost-libs
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2021-04-21 13:24:06 +00:00 |
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nut
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all: migrate some SourceForge homepage URLs back from https to http
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2020-01-26 05:26:08 +00:00 |
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openbabel
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revbump for boost-libs
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2021-04-21 13:24:06 +00:00 |
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p5-Bio-ASN1-EntrezGene
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p5-Bio-ASN1-EntrezGene: update to 1.73.
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2020-09-06 19:43:03 +00:00 |
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pdbalign
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phylip
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*: remove dead download locations
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2021-04-21 09:12:23 +00:00 |
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plink
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math/blas, math/lapack: Install interchangeable BLAS system
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2020-10-12 21:51:57 +00:00 |
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plinkseq
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Multiple packages: Replace obsolete maintainer email
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2019-01-13 22:06:42 +00:00 |
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primer3
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*: Convert broken sourceforge HOMEPAGEs back to http
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2020-03-20 11:57:22 +00:00 |
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profit
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puzzle
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biology: align variable assignments
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2019-11-02 22:09:00 +00:00 |
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py-biopython
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math/blas, math/lapack: Install interchangeable BLAS system
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2020-10-12 21:51:57 +00:00 |
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py-cutadapt
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py-cutadapt: updated to 3.4
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2021-03-31 09:23:56 +00:00 |
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py-dnaio
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(biology/py-dnaio) +BUILD_DEPENDS+= py-setuptools_scm (other than 27 are fixed)
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2021-03-04 13:06:34 +00:00 |
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py-mol
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math/blas, math/lapack: Install interchangeable BLAS system
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2020-10-12 21:51:57 +00:00 |
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py-pydicom
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py-pydicom: Update to 1.3.0
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2019-10-01 14:45:29 +00:00 |
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R-popbio
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biology/R-popbio: import R-popbio-2.7
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2020-08-10 18:18:46 +00:00 |
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rasmol
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samtools
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biology/htslib: Update to 1.12
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2021-03-20 18:17:07 +00:00 |
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sewer
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*: remove dead download location
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2021-04-21 09:11:13 +00:00 |
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stacks
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Revbump packages with a runtime Python dep but no version prefix.
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2020-12-04 20:44:57 +00:00 |
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stride
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trimmomatic
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biology/trimmomatic: import Trimmomatic-0.38
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2018-07-25 15:14:32 +00:00 |
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vcf-split
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biology/vcf-split: import vcf-split-0.1.1
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2021-03-24 15:22:29 +00:00 |
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vcf2hap
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biology/vcf2hap: import vcf2hap-0.1.2
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2021-03-24 18:22:53 +00:00 |
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vsearch
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Fix portability
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2020-03-26 02:37:38 +00:00 |
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xylem
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all: migrate homepages from http to https
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2020-01-26 17:30:40 +00:00 |
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Makefile
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biology/Makefile: Add vcf2hap
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2021-03-24 18:23:33 +00:00 |
