pkgsrc/math
wiz e8e9f14689 Update to 1.13:
* What is new in gsl-1.13:

** Upgraded to latest autoconf and automake (autoconf-2.64,
   automake-1.11)

** Fixed the rk4 and bspline allocators to avoid invalid free()
   calls under out of memory conditions. [bug #27194, #27236]

** Fixed a bug in gsl_multimin_fminimizer_nmsimplex2 where the center
   and size of the simplex were not updated on contract-by-best steps,
   causing failures in convergence. [bug #27180]

** Added new functions to set MISER and VEGAS Monte Carlo integration
   parameters, and to examine VEGAS chi-squared value and intermediate
   results.

** Added the function gsl_bspline_greville_abscissa to compute
   Greville abscissae for B-splines.

** The cumulative distribution functions gsl_cdf_gumbel1_{P,Q} should
   now handle a larger range of parameters without underflow and
   overflow.

** The header file gsl_const_cgs.h no longer defines values for
   electromagnetic units.  Applications should use gsl_const_cgsm.h
   instead to obtain the values in the CGS-Magnetic system.  The
   previous values for these units given in gsl_const_cgs.h were
   ill-defined as the type of CGS electromagnetic system was
   unspecified (the values were a mixture of CGS units with the Ampere
   of the MSKA system).  The affected constants are
   GSL_CONST_CGS_BOHR_MAGNETON, GSL_CONST_CGS_ELECTRON_CHARGE,
   GSL_CONST_CGS_ELECTRON_MAGNETIC_MOMENT, GSL_CONST_CGS_FARADAY,
   GSL_CONST_CGS_GAUSS, GSL_CONST_CGS_NUCLEAR_MAGNETON,
   GSL_CONST_CGS_PROTON_MAGNETIC_MOMENT, and GSL_CONST_CGS_ROENTGEN.

** The Pochhammer functions gsl_sf_poch(a,x) and gsl_sf_lnpoch(a,x) now
   handle the special cases where a and a+x are zero or negative
   integers.

** The confluent hypergeometric function gsl_sf_hyperg_U (a,b,x) now
   handles some cases where x=0. The case where 1+a-b is a negative
   integer no longer returns an error [bug #22859] and the incorrect
   termination of the series in certain cases is fixed [bug #26706].

** Added a new function gsl_poly_eval_derivs to evaluate a polynomial
   and its derivatives simultaneously.

** Added a new univariate minimisation algorithm
   gsl_min_fminimizer_quad_golden which is a variant of Brent's
   algorithm with safeguarded step-length adjustment.

** Added a new Nelder-Mead minimiser gsl_multimin_fminimizer_nmsimplex2rand
   which uses a randomly oriented simplex rather than one fixed on
   the coordinate axes [bug #25077]

** The texinfo file now uses the dircategory "Software libraries" from
   the Free Software Directory, as recommended in the Texinfo manual.

** The function gsl_ran_exponential now includes zero in its output
   range. [bug #25039]

** All functions for freeing allocated memory now accept a NULL
   pointer, following the standard C convention for free(). [bug
   #25319]

** The function gsl_sum_levin_u_accel now handles the special case
   c_0 + 0 + 0 + 0 + .... that occurs when summing power series
   c_n*x^n with x=0. [bug #26807]

** The functions gsl_linalg_LU_solve, gsl_linalg_LU_svx,
   gsl_linalg_LU_refine, gsl_linalg_LU_invert and their complex
   equivalents now return an error for singular matrices.

** The multifit LMDER hybrid solvers now check the return code of the
   user-supplied function in the gsl_multifit_fdfsolver_set
   method. [bug #26871]

** Improved the implementation of gsl_ran_discrete_preproc to avoid
   internal errors due to inconsistencies from excess precision on
   some platforms. [bug #26502]

** Corrected gsl_sf_hyperg_2F1(a,b,c,x) to not give a domain error in
   the case where c is a negative integer and the series terminates
   with a finite result.

** The C99 inline keyword is now supported, in addition to the
   previously supported GNU-style inline.

** Modified gsl_poly_complex_solve_cubic and gsl_poly_solve_cubic to
   avoid returning NaNs in cases where excess precision causes a
   change in the number of roots.

** Fixed incorrect length check in gsl_blas_drotm. [bug #26503]

** Fixed gsl_odeiv_step_gear2 to restore y on step failure

** gsl_odeiv_evolve_apply now restores the correct value of t on step
   failures [bug #26255].

** Using make install prefix=DIR now puts correct paths in package
   config files gsl-config and gsl.pc

** Modified gsl_monte_vegas to work around pow() function inaccuracies
   on MinGW [bug #25413].

** Increased the number of terms in gsl_sf_mathieu_a and
   gsl_sf_mathieu_b to improve convergence in difficult regions [bug
   #25075]
2009-10-31 01:27:26 +00:00
..
aamath Import aamath 0.3 as math/aamath. 2009-09-05 17:32:40 +00:00
abs Update HOMEPAGE and MASTER_SITES, set LICENSE (GNU GPL v.2). 2009-09-03 11:50:52 +00:00
admesh Fix broken homepage link 2009-09-13 23:53:07 +00:00
algae Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
antixls
aribas Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
bc Recursive ABI depends update and PKGREVISION bump for readline-6.0 shlib 2009-05-20 00:58:05 +00:00
blas Simply and speed up buildlink3.mk files and processing. 2009-03-20 19:23:50 +00:00
blitz++ Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
calc calc is included in emacs>=22. 2009-08-05 08:20:48 +00:00
calcoo bump revision because of graphics/jpeg update 2009-08-26 19:56:37 +00:00
capc-calc Update to calc 2.12.4.0. 2009-09-03 09:59:09 +00:00
cln bump ABI requirement for the new shlib major number 2009-09-09 17:29:01 +00:00
dcdflib.c Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
dcdflib.f Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
dfftpack Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
dieharder Mark packages as MAKE_JOBS_SAFE=no that failed in a bulk build with 2009-06-30 00:07:09 +00:00
djbfft Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
eigen2 Update eigen2 to 2.0.4. 2009-08-04 21:13:30 +00:00
eispack
ess PKGREVISION bump for elisp packages because of bytecode format changes 2009-08-06 01:44:45 +00:00
eukleides Not MAKE_JOBS_SAFE. 2009-07-16 14:32:49 +00:00
euler bump revision because of graphics/jpeg update 2009-08-26 19:56:37 +00:00
fftpack Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
fftw Update to 3.2.2. Set LICENSE to gnu-gpl-v2. 2009-08-14 16:14:17 +00:00
fftw2 Simply and speed up buildlink3.mk files and processing. 2009-03-20 19:23:50 +00:00
fftwf Simply and speed up buildlink3.mk files and processing. 2009-03-20 19:23:50 +00:00
fgmp dead mirror. fetch from backup. 2009-05-21 11:21:44 +00:00
fricas Improve PLIST maintainance. 2009-10-26 07:53:39 +00:00
galculator bump revision because of graphics/jpeg update 2009-08-26 19:56:37 +00:00
gap Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
gcalctool bump revision because of graphics/jpeg update 2009-08-26 19:56:37 +00:00
geg Add DESTDIR support. 2008-06-20 01:09:05 +00:00
genius Update Genius Calculator to version 1.0.7. 2009-09-03 13:15:19 +00:00
glpk Simply and speed up buildlink3.mk files and processing. 2009-03-20 19:23:50 +00:00
gnumeric PKGREVISION bump pkgs which are affected by the libgnome change 2009-10-29 23:14:13 +00:00
gp-autpgrp Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
gp-factint Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
gp-fplsa Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
gp-grape Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
gp-grpconst Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
gp-lag Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
grace bump revision because of graphics/jpeg update 2009-08-26 19:56:37 +00:00
graphopt Remove USE_DIRS from pkgsrc. 2009-07-22 09:01:16 +00:00
grpn update master_sites. remove ftp entry. service has been suspended. 2009-10-04 15:50:47 +00:00
gsl Update to 1.13: 2009-10-31 01:27:26 +00:00
gtklife bump revision because of graphics/jpeg update 2009-08-26 19:56:37 +00:00
lapack patch-ad: Don't remove the $(NOOPT) for slamch.f and dlamch.f 2009-10-20 14:00:23 +00:00
libffm Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
libmatheval Recursive ABI depends update and PKGREVISION bump for readline-6.0 shlib 2009-05-20 00:58:05 +00:00
linpack
ltm Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
mapm Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
mathomatic Update mathomatic to 14.5.5. 2009-09-22 02:05:50 +00:00
maxima Update to Maxima 5.19.2. 2009-08-31 11:41:04 +00:00
mcsim Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
meschach Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
metis Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
minpack
mpfr Simply and speed up buildlink3.mk files and processing. 2009-03-20 19:23:50 +00:00
mprime-bin Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
mtl Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
newmat Convert @exec/@unexec to @pkgdir or drop it. 2009-06-14 20:47:52 +00:00
nickle Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
ntl Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
octave Changes 3.2.3: 2009-10-12 09:28:02 +00:00
octave-forge bump revision because of graphics/jpeg update 2009-08-26 19:56:37 +00:00
odepack Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
openaxiom Convert @exec/@unexec to @pkgdir or drop it. 2009-06-14 20:47:52 +00:00
ordCalc ordCalc is a program for interactively dealing with ordinals (generalized 2009-09-18 14:09:26 +00:00
orpie Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
otter Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
p5-Excel-Template Import p5-Excel-Template version 0.31. 2008-10-20 22:41:15 +00:00
p5-Excel-Template-Plus Bumping revision of packages which depend direct or indirect on 2009-09-24 06:50:10 +00:00
p5-Math-Base85 Give up MAINTAINER 2009-07-17 18:00:13 +00:00
p5-Math-BaseCnv Added math/p5-Math-BaseCnv version 1.4.75 2008-10-26 19:12:13 +00:00
p5-Math-Bezier Bump the PKGREVISION for all packages which depend directly on perl, 2008-10-19 19:17:40 +00:00
p5-Math-BigInt-GMP Perl modules generally don't need static PLISTs. Fixes install on Darwin. 2009-07-24 16:52:18 +00:00
p5-Math-BigInt-Pari Importing package for p5 module Math::BigInt::Pari version 1.13 to support 2009-07-08 10:24:53 +00:00
p5-Math-BigInteger Bump the PKGREVISION for all packages which depend directly on perl, 2008-10-19 19:17:40 +00:00
p5-Math-FFT Bump the PKGREVISION for all packages which depend directly on perl, 2008-10-19 19:17:40 +00:00
p5-Math-GMP Updating math/p5-Math-GMP from 2.05 to 2.06 2009-09-22 20:40:35 +00:00
p5-Math-Interpolate Bump the PKGREVISION for all packages which depend directly on perl, 2008-10-19 19:17:40 +00:00
p5-Math-MatrixReal Bump the PKGREVISION for all packages which depend directly on perl, 2008-10-19 19:17:40 +00:00
p5-Math-Pari Apply patches/diff_2.1.7_-O from the distribution to fix Lunix build. No 2009-09-16 02:32:00 +00:00
p5-Math-Random Update to 0.71: 2009-02-22 16:21:11 +00:00
p5-Math-Random-MT-Perl Updating math/p5-Math-Random-MT-Perl from 1.05 to 1.06 2009-09-12 21:14:22 +00:00
p5-Math-Round Initial import of math/p5-Math-Round, needed by upcoming graphics/circos. 2009-04-21 17:46:39 +00:00
p5-Math-VecStat Initial import of math/p5-Math-VecStat, needed by upcoming graphics/circos. 2009-04-21 17:47:10 +00:00
p5-Number-Compare Bump the PKGREVISION for all packages which depend directly on perl, 2008-10-19 19:17:40 +00:00
p5-Number-Latin Bump the PKGREVISION for all packages which depend directly on perl, 2008-10-19 19:17:40 +00:00
p5-Roman Update from version 1.22 to 1.23. 2009-02-22 13:21:32 +00:00
p5-Set-Crontab Bump the PKGREVISION for all packages which depend directly on perl, 2008-10-19 19:17:40 +00:00
p5-Set-Infinite Bump the PKGREVISION for all packages which depend directly on perl, 2008-10-19 19:17:40 +00:00
p5-Spreadsheet-ParseExcel Update from version 0.5200 to version 0.5400 (upstream 0.54) 2009-08-26 00:54:57 +00:00
p5-Spreadsheet-Read Update p5-Spreadsheet-Read from version 0.34 to version 0.35. 2009-08-30 00:51:19 +00:00
p5-Spreadsheet-ReadSXC Initial import of p5-Spreadsheet-ReadSXC version 0.20 in the NetBSD 2009-02-01 09:04:02 +00:00
p5-Spreadsheet-WriteExcel Updated from version 2.23nb1 to 2.25. 2008-11-18 06:11:01 +00:00
p5-Spreadsheet-XLSX Update p5-Spreadsheet-XLSX from version 0.09 to version 0.10 (0.1 upstream). 2009-08-30 00:35:15 +00:00
p5-Statistics-Descriptive Updating package for p5 module Statistics::Descriptive from 2.6 to 3.0100 2009-08-18 14:03:06 +00:00
pari Convert @exec/@unexec to @pkgdir or drop it. 2009-06-14 20:47:52 +00:00
pari-galdata
pear-Numbers_Roman Give up MAINTAINER 2009-07-17 18:00:13 +00:00
pear-Numbers_Words Give up MAINTAINER 2009-07-17 18:00:13 +00:00
php-bcmath bcmath extension bundled with PHP 5.3 needs a patch to build as an extension module, 2009-07-10 20:00:00 +00:00
pspp resolve lib/charset.alias conflicts. PR pkg/42199 2009-10-21 16:51:46 +00:00
py-ephem Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
py-fpconst Simply and speed up buildlink3.mk files and processing. 2009-03-20 19:23:50 +00:00
py-networkx Convert @exec/@unexec to @pkgdir or drop it. 2009-06-14 20:47:52 +00:00
py-numarray Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
py-Numeric Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
py-numpy Avoid picking up other fortran compilers when they are installed. 2009-10-24 14:22:49 +00:00
py-pytables Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
py-rpy Catch up with PLIST changes. Bump revision. 2008-09-19 14:39:00 +00:00
py-Scientific Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
py-Scientific-doc Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
py-scipy Remove "PYTHON_VERSIONS_ACCEPTED= 26 25 24" which is unnecessary 2009-09-23 09:54:45 +00:00
py-sympy update to 0.6.5 2009-09-15 11:30:55 +00:00
qalculate Bump revision after CLN update. Addresses PR pkg/42006. 2009-09-08 19:29:35 +00:00
qalculate-bases Fix build after CLN update. Bump revision (autoconf dependency). 2009-09-06 15:24:38 +00:00
qalculate-currency Fix build after CLN update. Bump revision (autoconf dependency). 2009-09-06 15:24:38 +00:00
qalculate-gtk PKGREVISION bump pkgs which are affected by the libgnome change 2009-10-29 23:14:13 +00:00
qalculate-kde Fix build after CLN update. Bump revision (autoconf dependency). 2009-09-06 15:40:49 +00:00
qalculate-units Fix build after CLN update. Bump revision (autoconf dependency). 2009-09-06 15:40:49 +00:00
qhull Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
quadpack Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
R bump revision because of graphics/jpeg update 2009-08-26 19:56:37 +00:00
R-abind Fix homepage. 2008-10-13 11:30:50 +00:00
R-akima Fix homepage. 2008-10-13 11:31:32 +00:00
R-CGIwithR Update R-CGIwithR to 0.72. 2008-10-13 11:12:52 +00:00
R-chron Update R-chron to 2.3.24 2008-10-13 11:34:21 +00:00
R-circular Initial import of R-circular version 0.3.8 2008-10-14 07:12:44 +00:00
R-clim.pact Update R-clim.pact to 2.2.15 2008-10-14 08:00:31 +00:00
R-combinat Fix homepage. 2008-10-13 11:35:13 +00:00
R-DAAG Update R-DAAG to 0.97 2008-10-13 11:14:55 +00:00
R-date Update R-date to 1.2.26 2008-10-13 11:38:19 +00:00
R-gdata Update R-gdata to 2.4.2 2008-10-14 07:31:26 +00:00
R-genetics Update R-genetics to 1.3.4 2008-10-14 07:38:26 +00:00
R-geoR Update R-geoR to 0.9.26 2008-10-14 08:19:07 +00:00
R-GRASS Update R-GRASS to 0.3.7 2008-10-13 11:17:04 +00:00
R-gstat Update R-gstat to 0.9.51 2008-10-14 08:24:23 +00:00
R-gtools Update R-gtools to 2.5.0 2008-10-14 06:51:09 +00:00
R-httpRequest Update R-httpRequest to 0.0.6 2008-10-14 06:44:25 +00:00
R-hwde Update R-hwde to 0.5 2008-10-14 06:41:35 +00:00
R-ISwR Update R-ISwR to 2.0.2 2008-10-13 11:19:45 +00:00
R-lmm fixup patch from previous. 2008-10-14 22:41:44 +00:00
R-mapproj Update R-mapproj to 1.1.7.2 2008-10-14 06:01:48 +00:00
R-maps Update to R-maps 2.0.40 2008-10-14 05:54:25 +00:00
R-Matrix Update R-Matrix to 0.999375.15 2008-10-13 11:22:46 +00:00
R-mvtnorm Update R-mvtnorm to 0.9.2 2008-10-14 05:47:36 +00:00
R-ncdf Fix homepage. 2008-10-14 05:42:14 +00:00
R-PHYLOGR Update R-PHYLOGR to 1.0.6 2008-10-13 11:24:40 +00:00
R-pixmap Update R-pixmap to 0.4.9 2008-10-14 05:35:47 +00:00
R-R2HTML Update R-R2HTML to 1.59 2008-10-13 11:27:50 +00:00
R-RArcInfo Update R-RArcInfo to 0.4.7 2008-10-13 11:29:42 +00:00
R-Rcmdr Update R-Rcmdr to 1.4.2 2008-10-14 07:25:31 +00:00
R-sgeostat Update R-sgeostat to 1.0.21 2008-10-13 19:26:12 +00:00
R-shapefiles Update R-shapefiles to 0.6 2008-10-13 19:27:42 +00:00
R-sp Initial import of R-sp version 0.9.26 2008-10-14 08:15:24 +00:00
R-statmod Update R-statmod to 1.3.6 2008-10-13 19:28:48 +00:00
R-wle Update R-wle to 0.9.3 2008-10-14 07:16:50 +00:00
randlib Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
ruby-rb-gsl Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
sc Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
scilab guard against undefined PKGSRC_FORTRAN. Caught by pbulk on Solaris. 2009-10-11 23:17:03 +00:00
slatec Simply and speed up buildlink3.mk files and processing. 2009-03-20 19:23:50 +00:00
snns Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
statist Mark packages as MAKE_JOBS_SAFE=no that failed in a bulk build with 2009-06-30 00:07:09 +00:00
superlu Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
tasp-vsipl Add "lib" to the list of installation directories. 2009-07-09 09:19:03 +00:00
texdrive PKGREVISION bump for elisp packages because of bytecode format changes 2009-08-06 01:44:45 +00:00
tochnog Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
udunits Mark packages as MAKE_JOBS_SAFE=no that failed in a bulk build with 2009-06-30 00:07:09 +00:00
units Recursive ABI depends update and PKGREVISION bump for readline-6.0 shlib 2009-05-20 00:58:05 +00:00
vista MAKE_JOBS_SAFE=no 2009-10-07 15:56:11 +00:00
xeukleides MAKE_JOBS_SAFE=no 2009-08-03 15:57:45 +00:00
xfractint Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
xgap Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
xldlas bump revision because of graphics/jpeg update 2009-08-26 19:56:37 +00:00
xlife Convert @exec/@unexec to @pkgdir or drop it. 2009-06-14 20:47:52 +00:00
xlispstat Make it build on recent DragonFly. 2009-08-01 05:22:38 +00:00
xmgr Remove @dirrm entries from PLISTs 2009-06-14 18:03:28 +00:00
yacas Update to YACAS 1.2.2. 2009-09-05 13:07:09 +00:00
yorick Mark packages as MAKE_JOBS_SAFE=no that failed in a bulk build with 2009-06-30 00:07:09 +00:00
Makefile math/ordCalc, an ordinals calculator 2009-09-18 14:15:30 +00:00