VSEARCH supports de novo and reference based chimera detection, clustering, full-length and prefix dereplication, rereplication, reverse complementation, masking, all-vs-all pairwise global alignment, exact and global alignment searching, shuffling, subsampling and sorting. It also supports FASTQ file analysis, filtering, conversion and merging of paired-end reads. The aim of this project is to create an alternative to the USEARCH tool developed by Robert C. Edgar (2010).
9 lines
478 B
Text
9 lines
478 B
Text
VSEARCH supports de novo and reference based chimera detection,
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clustering, full-length and prefix dereplication, rereplication,
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reverse complementation, masking, all-vs-all pairwise global
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alignment, exact and global alignment searching, shuffling,
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subsampling and sorting. It also supports FASTQ file analysis,
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filtering, conversion and merging of paired-end reads.
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The aim of this project is to create an alternative to the USEARCH
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tool developed by Robert C. Edgar (2010).
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