zeros as a problem

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mozoezomoe 2024-05-13 19:31:53 +02:00
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DIARIO.txt Normal file
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Problema: desbalanceo de resultados debido a muchos ceros en algunas variables
1. Probamos sklearn.RF con dataset urineFlav con dropna, que es el que menos afectado se ve
2. Probamos XGBRF para manejar NAs sin necesidad de imputarlos a cero.
Posibles soluciones:
Hay que ver si hay implementación de MLP que maneje NAs

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# Pendientes
- ajustar nombre modelo -> refinar
- probar 50/50, 60/40 train
- modulos evalScore, plots, RF_fit, XGB_fit, NN_fit (quizá NN_eval)
- gestionar dependencias
## ideas NAs
- usar los voluntarios con ceros como training
- probar todas las posibles combinaciones de retirar NAs en train

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# Recursos metabolómica
## General
- http://internationalmetabolomicssociety.org/resources
## DDBB
- https://mona.fiehnlab.ucdavis.edu/
- http://bigg.ucsd.edu/
- https://bmrb.io/metabolomics/
- https://www.ebi.ac.uk/metabolights
## DDBB adicionales
- https://www.genome.jp/kegg/pathway.html
-

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