# Hierarchical K-Means Clustering: Optimize Clusters # https://www.datanovia.com/en/lessons/hierarchical-k-means-clustering-optimize-clusters/ # Install factoextra package if needed if(!require(factoextra)) install.packages("factoextra", repos = "http://cran.us.r-project.org") # Load factoextra library library(factoextra) res.hk <-hkmeans(data.frame(som.model$codes), k) # Elements returned by hkmeans() names(res.hk) # Print the results str(res.hk) # Visualize the tree fviz_dend(res.hk, cex = 0.6, palette = "jco", rect = TRUE, rect_border = "jco", rect_fill = TRUE) # Visualize the hkmeans final clusters fviz_cluster(res.hk, palette = "jco", repel = TRUE, ggtheme = theme_classic()) plot(som.model, main = '', type = "property", property = res.hk$hclust$order, palette.name = topo.colors) add.cluster.boundaries(som.model, res.hk$hclust$order)