Add latexindent backupfiles to build files
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$pdf_mode = 1;
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$pdf_mode = 1;
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$pdflatex = 'pdflatex --shell-escape';
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$pdflatex = 'pdflatex --shell-escape';
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$clean_ext = '%R_contourtmp0.dat %R_contourtmp0.table %R_contourtmp0.script thm';
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$clean_ext = '%R_contourtmp0.dat %R_contourtmp0.table %R_contourtmp0.script thm %R.bak*';
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