3
5
Fork 0
mirror of git://git.savannah.gnu.org/guix.git synced 2023-12-14 03:33:07 +01:00
Commit graph

79137 commits

Author SHA1 Message Date
Ricardo Wurmus
5ce21e7153
gnu: r-rtracklayer: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.52.0.
[propagated-inputs]: Add r-biocio and r-restfulr.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
e22d743aa6
gnu: r-rsamtools: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-rsamtools): Update to 2.8.0.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
f2f4ca7456
gnu: r-rhdf5filters: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-rhdf5filters): Update to 1.4.0.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
51bee5c40f
gnu: r-reportingtools: Update to 2.32.0.
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.32.0.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
2da4ee4c77
gnu: r-regioner: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-regioner): Update to 1.24.0.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
38fa99c1d0
gnu: r-rcas: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-rcas): Update to 1.18.0.
[propagated-inputs]: Add r-knitr.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
7c45bc9391
gnu: r-rbgl: Update to 1.68.0.
* gnu/packages/bioconductor.scm (r-rbgl): Update to 1.68.0.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
dc67525ae6
gnu: r-protgenerics: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-protgenerics): Update to 1.24.0.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
0ec6177cc1
gnu: r-pcamethods: Update to 1.84.0.
* gnu/packages/bioconductor.scm (r-pcamethods): Update to 1.84.0.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
5d37cee6c1
gnu: r-organismdbi: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-organismdbi): Update to 1.34.0.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
00b2174930
gnu: r-mzid: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-mzid): Update to 1.30.0.
2021-06-05 09:12:44 +02:00
Ricardo Wurmus
d647eb090b
gnu: r-msnbase: Update to 2.18.0.
* gnu/packages/bioconductor.scm (r-msnbase): Update to 2.18.0.
[propagated-inputs]: Remove r-preprocesscore; add r-mscoreutils.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
c966cef2b4
gnu: r-mutationalpatterns: Update to 3.2.0.
* gnu/packages/bioconductor.scm (r-mutationalpatterns): Update to 3.2.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
0b3fd7e89a
gnu: r-methylkit: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-methylkit): Update to 1.18.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
595b75e05c
gnu: r-limma: Update to 3.48.0.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.48.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
60b598ee16
gnu: r-keggrest: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-keggrest): Update to 1.32.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
2cbb8e19af
gnu: r-interactivedisplaybase: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-interactivedisplaybase): Update to 1.30.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
94b4e64fd0
gnu: r-impute: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-impute): Update to 1.66.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
76fc8a53b2
gnu: r-rhtslib: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-rhtslib): Update to 1.24.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
78eb1fdf3e
gnu: r-hpar: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-hpar): Update to 1.34.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
330a7fe3b1
gnu: r-gseabase: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-gseabase): Update to 1.54.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
214e784b57
gnu: r-gostats: Update to 2.58.0.
* gnu/packages/bioconductor.scm (r-gostats): Update to 2.58.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
1b44202e20
gnu: r-genomicranges: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-genomicranges): Update to 1.44.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
d491b7eb1a
gnu: r-genomicfiles: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-genomicfiles): Update to 1.28.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
62889b9915
gnu: r-genomicfeatures: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.44.0.
[propagated-inputs]: Add r-biocio.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
570e80d62f
gnu: r-genomicalignments: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-genomicalignments): Update to 1.28.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
f88ab81fc7
gnu: r-genomeinfodb: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.28.0.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
ef7bbc40de
gnu: r-genomation: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-genomation): Update to 1.24.0.
[propagated-inputs]: Remove r-runit.
2021-06-05 09:12:43 +02:00
Ricardo Wurmus
3c024e9e96
gnu: r-geneoverlap: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-geneoverlap): Update to 1.28.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
389ce4e42b
gnu: r-genefilter: Update to 1.74.0.
* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.74.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
f22f4caa69
gnu: r-gage: Update to 2.42.0.
* gnu/packages/bioconductor.scm (r-gage): Update to 2.42.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
ff59b34dc3
gnu: r-fastseg: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-fastseg): Update to 1.38.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
6abbb53c3e
gnu: r-ensembldb: Update to 2.16.0.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
bdc1b908d3
gnu: r-edger: Update to 3.34.0.
* gnu/packages/bioconductor.scm (r-edger): Update to 3.34.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
f998c95d60
gnu: r-edaseq: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-edaseq): Update to 2.26.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
30ce1f9b66
gnu: r-dirichletmultinomial: Update to 1.34.0.
* gnu/packages/bioconductor.scm (r-dirichletmultinomial): Update to 1.34.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
e9445cdd78
gnu: r-dexseq: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-dexseq): Update to 1.38.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
45225c60cc
gnu: r-deseq2: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-deseq2): Update to 1.32.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
2835e7c0be
gnu: r-copywriter: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-copywriter): Update to 2.24.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
a8cfce4852
gnu: r-complexheatmap: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-complexheatmap): Update to 2.8.0.
[propagated-inputs]: Remove r-s4vectors; add r-doparallel and r-foreach.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
d296ac9cde
gnu: r-chipseq: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-chipseq): Update to 1.42.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
ca10bafc65
gnu: r-chipseeker: Update to 1.28.3.
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.28.3.
[inputs]: Remove r-knitr.
[native-inputs]: Add r-knitr.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
336107c13d
gnu: r-category: Update to 2.58.0.
* gnu/packages/bioconductor.scm (r-category): Update to 2.58.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
e039d07bf8
gnu: r-bsgenome: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.60.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
98f3c55999
gnu: r-biovizbase: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-biovizbase): Update to 1.40.0.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
16fe6abd27
gnu: r-biostrings: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.60.0.
[propagated-inputs]: Add r-genomeinfodb.
2021-06-05 09:12:42 +02:00
Ricardo Wurmus
3eedef80e4
gnu: r-biocparallel: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.26.0.
2021-06-05 09:12:41 +02:00
Ricardo Wurmus
f9ae0a4102
gnu: r-biomart: Update to 2.48.0.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.0.
[propagated-inputs]: Remove r-openssl and r-xml2; add r-digest.
2021-06-05 09:12:41 +02:00
Ricardo Wurmus
8be5d4f6fc
gnu: r-biobase: Update to 2.52.0.
* gnu/packages/bioconductor.scm (r-biobase): Update to 2.52.0.
2021-06-05 09:12:41 +02:00
Ricardo Wurmus
baaed6fd68
gnu: r-bamsignals: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-bamsignals): Update to 1.24.0.
2021-06-05 09:12:41 +02:00