freebsd-ports/biology/py-bcbio-gff/Makefile

PORTNAME=	bcbio-gff
DISTVERSION=	0.7.0
CATEGORIES=	biology python
MASTER_SITES=	PYPI
PKGNAMEPREFIX=	${PYTHON_PKGNAMEPREFIX}

MAINTAINER=	jwb@FreeBSD.org
COMMENT=	Read and write Generic Feature Format (GFF) with Biopython integration
WWW=		https://pypi.python.org/project/bcbio-gff/

LICENSE=	BSD3CLAUSE
LICENSE_FILE=	${WRKSRC}/LICENSE

USES=		python
USE_PYTHON=	autoplist distutils

.include <bsd.port.mk>
biology/py-bcbio-gff: Read and write Generic Feature Format (GFF) Read and write Generic Feature Format (GFF) with Biopython integration. Also adding py-dna-features-viewer to Makefile, missed on last commit 2022-02-03 20:37:21 +01:00			`PORTNAME= bcbio-gff`
biology/py-bcbio-gff: Update to 0.7.0 Fix compatibility with biopython 1.81 Changes: https://github.com/chapmanb/bcbb/commits/master Reported by: portscout 2023-03-16 23:29:49 +01:00			`DISTVERSION= 0.7.0`
biology/py-bcbio-gff: Read and write Generic Feature Format (GFF) Read and write Generic Feature Format (GFF) with Biopython integration. Also adding py-dna-features-viewer to Makefile, missed on last commit 2022-02-03 20:37:21 +01:00			`CATEGORIES= biology python`
/: rename CHEESESHOP to PYPI in MASTER_SITES PR: 267994 Differential revision: D37518 Approved by: bapt 2023-01-11 16:47:15 +01:00			`MASTER_SITES= PYPI`
biology/py-bcbio-gff: Read and write Generic Feature Format (GFF) Read and write Generic Feature Format (GFF) with Biopython integration. Also adding py-dna-features-viewer to Makefile, missed on last commit 2022-02-03 20:37:21 +01:00			`PKGNAMEPREFIX= ${PYTHON_PKGNAMEPREFIX}`

			`MAINTAINER= jwb@FreeBSD.org`
			`COMMENT= Read and write Generic Feature Format (GFF) with Biopython integration`
Add WWW entries to port Makefiles It has been common practice to have one or more URLs at the end of the ports' pkg-descr files, one per line and prefixed with "WWW:". These URLs should point at a project website or other relevant resources. Access to these URLs required processing of the pkg-descr files, and they have often become stale over time. If more than one such URL was present in a pkg-descr file, only the first one was tarnsfered into the port INDEX, but for many ports only the last line did contain the port specific URL to further information. There have been several proposals to make a project URL available as a macro in the ports' Makefiles, over time. This commit implements such a proposal and moves one of the WWW: entries of each pkg-descr file into the respective port's Makefile. A heuristic attempts to identify the most relevant URL in case there is more than one WWW: entry in some pkg-descr file. URLs that are not moved into the Makefile are prefixed with "See also:" instead of "WWW:" in the pkg-descr files in order to preserve them. There are 1256 ports that had no WWW: entries in pkg-descr files. These ports will not be touched in this commit. The portlint port has been adjusted to expect a WWW entry in each port Makefile, and to flag any remaining "WWW:" lines in pkg-descr files as deprecated. Approved by: portmgr (tcberner) 2022-09-07 23:06:12 +02:00			`WWW= https://pypi.python.org/project/bcbio-gff/`
biology/py-bcbio-gff: Read and write Generic Feature Format (GFF) Read and write Generic Feature Format (GFF) with Biopython integration. Also adding py-dna-features-viewer to Makefile, missed on last commit 2022-02-03 20:37:21 +01:00
			`LICENSE= BSD3CLAUSE`
			`LICENSE_FILE= ${WRKSRC}/LICENSE`

			`USES= python`
			`USE_PYTHON= autoplist distutils`

			`.include <bsd.port.mk>`