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Author SHA1 Message Date
Baptiste Daroussin
a2abbb121d update to 0.9.0 2019-12-27 09:00:38 +00:00
Yuri Victorovich
63984995f8 math/gretl: Update 2019a -> 2019d 2019-12-26 19:47:42 +00:00
Yuri Victorovich
1dc6cb1c48 math/gretl: Fix build on systems w/out omp.h in the base system; Add the MPI option that is off and broken for now 
Reported by:	fallout
 2019-12-26 19:34:35 +00:00
Yuri Victorovich
65013e9d66 math/csdp: Fix build where omp.h is missing in the base system 
Reported by:	fallout
 2019-12-26 16:32:33 +00:00
Ganael LAPLANCHE
23cb661f63 Update devel/tbb to 2020.0 and bump dependent ports' revisions [1] 
Also, while here, re-generate patches using the makepatch target

[1] Changelog: https://github.com/intel/tbb/blob/v2020.0/CHANGES
 2019-12-26 16:25:22 +00:00
Antoine Brodin
de61a87208 Deprecate a few ports 
With hat:	portmgr
 2019-12-26 07:54:28 +00:00
Antoine Brodin
3d74f744d0 Mark BROKEN 
Reported by:	pkg-fallout
 2019-12-25 08:56:12 +00:00
Tobias Kortkamp
694a285108 math/mkl-dnn: Spell CXXFLAGS_i386 correctly 2019-12-25 07:07:38 +00:00
Yuri Victorovich
faa656bf5f math/py-primme: Update 2.2 -> 3.0 
Reported by:	portscout
 2019-12-25 06:51:05 +00:00
Yuri Victorovich
04375ba26a math/primme: Update 2.2 -> 3.0 
Reported by:	portscout
 2019-12-25 06:50:18 +00:00
Yuri Victorovich
2ccae0d998 math/alglib: Update 3.15.0 -> 3.16.0 
Reported by:	portscout
 2019-12-25 01:57:47 +00:00
Yuri Victorovich
2e15b4aafd math/cadabra2: Update 2.2.7 -> 2.2.8 
Reported by:	portscout
 2019-12-25 01:53:15 +00:00
Yuri Victorovich
0d770c8b05 math/xtensor: Update 0.21.1 -> 0.21.2 
Reported by:	portscout
 2019-12-25 00:44:18 +00:00
Piotr Kubaj
9c71e3245a math/mkl-dnn: fix build on non-x86 
Remove hardcoded -msse4.1 and instead add it to our Makefile, but only on amd64 and i386.

PR:		242847
Approved by:	yuri (maintainer)
 2019-12-24 13:40:02 +00:00
Yuri Victorovich
14388d64e3 math/rumur: Update 2019.11.24 -> 2019.12.22 
Reported by:	portscout
 2019-12-24 07:50:05 +00:00
Eric Turgeon
3c953b617c update math/mate-calc to 1.22.2 2019-12-23 23:27:01 +00:00
Thierry Thomas
f46c47ff71 Remove math/metis-edf: now the regular math/metis is sufficient for Code_Aster. 2019-12-23 20:14:54 +00:00
Thierry Thomas
785dabb6ab Upgrade Code_Aster to 14.4.0-1. 
PR:		242655
 2019-12-23 20:10:09 +00:00
Tobias C. Berner
baa4e84703 math/wxmaxima: Update to 19.12.2 
PR:		242836
Submitted by:	Lorenzo Salvadore <phascolarctos@protonmail.ch> (maintainer)
 2019-12-23 18:20:23 +00:00
Mark Linimon
9d144d4cb1 Fix build on GCC-based systems: 
cc1plus: error: unrecognized command line option "-std=c++11"

Approved by:	portmgr (tier-2 blanket)
 2019-12-22 17:59:20 +00:00
Yuri Victorovich
c4081f1fe7 New port: math/csdp: Solver for semidefinite programming problems 2019-12-22 00:55:53 +00:00
Yuri Victorovich
9c6fef9844 New port: math/rehearse: Algebraic modeling library in C++ for linear optimization solvers 2019-12-21 23:16:45 +00:00
Yuri Victorovich
88ae0a2723 math/cbc: Update 2.9.9 -> 2.10.3 2019-12-21 22:58:54 +00:00
Yuri Victorovich
8eac97c0f2 math/cgl: Update 0.59.10 -> 0.60.2 2019-12-21 22:56:31 +00:00
Yuri Victorovich
a7973a9061 math/clp: Update 1.16.10 -> 1.17.3 
PR:		220232
Submitted by:	pfg
Approved by:	co9co9@gmail.com (maintainer's timeout; 2+ years)
 2019-12-21 22:55:31 +00:00
TAKATSU Tomonari
6db0a3ceff - Update to 0.99.21 2019-12-21 07:49:04 +00:00
TAKATSU Tomonari
8ec40065e8 - Update to 0.1.8 2019-12-21 07:36:09 +00:00
Brooks Davis
9b1a5c1c07 Additional builds with with src r354909 applied. 
The referenced change made NO_INSTALLLIB, NO_MAN, and NO_PROFILE into
errors causing these ports that declare them and use the FreeBSD make
infrastructure as part of their build to fail.

When the offending variables occur in a BSD Makefile, NO_MAN becomes
MAN= and NO_INSTALLLIB and NO_PROFILE become MK_INSTALLLIB=no and
MK_PROFILE=no respectively.  When declared in the environment they
become WITHOUT_<FOO>.

Also GC NO_MANCOMPRESSED which doesn't do anything.

In the case of devel/libpasori, this change accomplished the same thing
as the change in r518434, but more directly (fix the Makefiles rather
than patching them after they are installed).
 2019-12-20 23:24:40 +00:00
Tobias C. Berner
2e9af81b9a devel/grantlee: update to 5.2.0 
- While here, remove the patches to install the headers in a prefix;
  there currently is only one grantlee version in the tree, so no
  reason to make life harder for ourselves.
 2019-12-20 19:10:44 +00:00
Yuri Victorovich
86f0224ec8 math/bitwise: Update 0.40 -> 0.41 
Reported by:	portscout
 2019-12-19 07:49:56 +00:00
Rene Ladan
b51b839969 Remove PHP 7.1 ports, upstream security support ended on 2019-12-01 : 
2019-12-01 archivers/php71-bz2
2019-12-01 archivers/php71-phar
2019-12-01 archivers/php71-zip
2019-12-01 archivers/php71-zlib
2019-12-01 converters/php71-iconv
2019-12-01 converters/php71-mbstring
2019-12-01 converters/php71-recode
2019-12-01 databases/php71-dba
2019-12-01 databases/php71-interbase
2019-12-01 databases/php71-mysqli
2019-12-01 databases/php71-odbc
2019-12-01 databases/php71-pdo
2019-12-01 databases/php71-pdo_dblib
2019-12-01 databases/php71-pdo_firebird
2019-12-01 databases/php71-pdo_mysql
2019-12-01 databases/php71-pdo_odbc
2019-12-01 databases/php71-pdo_pgsql
2019-12-01 databases/php71-pdo_sqlite
2019-12-01 databases/php71-pgsql
2019-12-01 databases/php71-sqlite3
2019-12-01 devel/php71-gettext
2019-12-01 devel/php71-intl
2019-12-01 devel/php71-json
2019-12-01 devel/php71-pcntl
2019-12-01 devel/php71-readline
2019-12-01 devel/php71-shmop
2019-12-01 devel/php71-sysvmsg
2019-12-01 devel/php71-sysvsem
2019-12-01 devel/php71-sysvshm
2019-12-01 devel/php71-tokenizer
2019-12-01 ftp/php71-curl
2019-12-01 ftp/php71-ftp
2019-12-01 graphics/php71-exif
2019-12-01 graphics/php71-gd
2019-12-01 lang/php71
2019-12-01 mail/php71-imap
2019-12-01 math/php71-bcmath
2019-12-01 math/php71-gmp
2019-12-01 misc/php71-calendar
2019-12-01 net/php71-ldap
2019-12-01 net/php71-soap
2019-12-01 net/php71-sockets
2019-12-01 net/php71-xmlrpc
2019-12-01 net-mgmt/php71-snmp
2019-12-01 security/php71-filter
2019-12-01 security/php71-hash
2019-12-01 security/php71-mcrypt
2019-12-01 security/php71-openssl
2019-12-01 sysutils/php71-fileinfo
2019-12-01 sysutils/php71-posix
2019-12-01 textproc/php71-ctype
2019-12-01 textproc/php71-dom
2019-12-01 textproc/php71-enchant
2019-12-01 textproc/php71-pspell
2019-12-01 textproc/php71-simplexml
2019-12-01 textproc/php71-wddx
2019-12-01 textproc/php71-xml
2019-12-01 textproc/php71-xmlreader
2019-12-01 textproc/php71-xmlwriter
2019-12-01 textproc/php71-xsl
2019-12-01 www/mod_php71
2019-12-01 www/php71-opcache
2019-12-01 www/php71-session
2019-12-01 www/php71-tidy
 2019-12-17 20:21:15 +00:00
Antoine Brodin
cb1bf26737 Unbreak bulk -a 2019-12-17 13:33:40 +00:00
Baptiste Daroussin
69a34fb938 Update to 0.8.9 2019-12-17 06:49:08 +00:00
TAKATSU Tomonari
da0f4e988c - Update to 5.54 2019-12-16 17:19:59 +00:00
Baptiste Daroussin
40b756ba24 Update to 0.10.46 and only keep one libgoffice version 
libgoffice 0.10 has been introduced long enough ago 6 years ago, stopping support
for libgoffice 0.8, it is now more than time, to remove libgoffice 0.8 and only
keep 0.10.

Remove the optionnal goffice option for projects not supporting 0.10.
 2019-12-16 17:06:38 +00:00
Antoine Brodin
7ce822bd88 Bump PORTREVISION after r520219 2019-12-16 09:22:43 +00:00
Joseph Mingrone
c055fde4be math/libRmath: Update to version 3.6.2 
See the NEWS file for upstream changes:
https://cran.r-project.org/doc/manuals/r-release/NEWS.html
 2019-12-16 03:10:00 +00:00
Joseph Mingrone
571219beb1 math/libRmath: Standardize formatting using ports-mgmt/portfmt 2019-12-16 03:09:51 +00:00
Yuri Victorovich
adbbc97d34 math/darknet: Update g20180914 -> 3-446 
Update to a maintained fork under the AlexeyAB GitHub account.
 2019-12-16 02:06:55 +00:00
Joseph Mingrone
b0815fee3f math/R: Update to version 3.6.2 
See the NEWS file for upstream changes:
https://cran.r-project.org/doc/manuals/r-release/NEWS.html
 2019-12-15 19:50:41 +00:00
Joseph Mingrone
8ec4c814c9 math/R: No-op to standardize formatting using ports-mgmt/portfmt 2019-12-15 19:50:37 +00:00
Antoine Brodin
a5e9dd5bcc Fix plist 
PR:		233770
 2019-12-15 15:49:19 +00:00
Antoine Brodin
b992db8b05 According to upstream, py-basemap is deprecated and only support python 2.7 
PR:		233770
 2019-12-14 09:00:30 +00:00
Yuri Victorovich
c56eb93944 math/ensmallen: Update 2.10.4 -> 2.10.5 
Reported by:	portscout
 2019-12-14 07:21:21 +00:00
Yuri Victorovich
f147713cfb math/py-Pyomo: Update 5.6.7 -> 5.6.8 
Reported by:	portscout
 2019-12-14 07:20:45 +00:00
TAKATSU Tomonari
0048bbbb59 - Update to 1.78 2019-12-14 05:26:56 +00:00
Fernando Apesteguía
cabd7fda3d math/wxmaxima: update to 19.12.1 
ChangeLog: https://github.com/wxMaxima-developers/wxmaxima/releases

Accumulated changes since 19.11.11:

 * wxMaxima now uses C++11 that makes the code more readable and helps finding
   bugs
 * If found wxMaxima now asks cppcheck to find bugs
 * Increased the speed of the program again
 * Opening the config dialogue since 19.11.0 unchecked "offer known answers"
 * For Cmake>=3.10.0 the build system now asks cppcheck to find bugs.
 * Changing the worksheet style was partially broken.
 * A big number of additional bug fixes in various places
 * A config option that forces displaying all multiplication signs.
 * Made the tooltips more visible
 * Added a warning tooltip about missing multiplication signs
 * Sped up drawing of new cells correcting the size calculations
 * If lookalike chars are used in a way that can cause hard-to-find errors now a
   warning tooltip is generated
 * A few additional bug fixes that (besides others) resolve a potential crash
 * An option to turn all multiplication dots on

PR:	242538
Submitted by:	phascolarctos@protonmail.ch (maintainer)
 2019-12-13 16:08:12 +00:00
Yuri Victorovich
4fa62d340c New port: math/wavelib: Wavelet Transform (DWT, SWT and MODWT) 2019-12-13 01:57:26 +00:00
Tobias C. Berner
f306859985 KDE's December 2019 Apps Update 
New versions of KDE applications landing in December

The release of new versions for KDE applications is part of KDE’s continued
effort to bring you a complete and up-to-date catalog of fully-featured,
beautiful and useful programs for your system.

Available now are new versions of KDE’s file browser Dolphin; Kdenlive, one of
the most complete open source video editors; the document viewer Okular; KDE’s
image viewer, Gwenview; and all of your other favorite KDE apps and utilities.
All of these applications have been improved, making them faster and more
stable and they boast exciting new features. The new versions of KDE
applications let you be productive and creative, while at the same time making
use of KDE software easy and fun.

We hope you enjoy all the novel features and improvements worked into all of
KDE’s apps!

Announcement: https://kde.org/announcements/releases/2019-12-apps-update/
 2019-12-12 23:24:36 +00:00
Stephen Montgomery-Smith
155acc8dce - Update to 3.4.5. 2019-12-12 22:41:29 +00:00
Yuri Victorovich
69f7ce7e03 math/xtensor: Update 0.20.10 -> 0.21.1 
Reported by:	portscout
 2019-12-12 04:51:59 +00:00
Jan Beich
701aa3bcf8 devel/boost-*: update to 1.72.0 
Changes:	http://www.boost.org/users/history/version_1_72_0.html
PR:		241449
Exp-run by:	antoine
Differential Revision:	https://reviews.freebsd.org/D22136
 2019-12-11 17:53:48 +00:00
TAKATSU Tomonari
d05ffb72d7 - Update to 1.5-0 
- Fix LICENSE section
- Update WWW: line in pkg-descr
 2019-12-11 17:37:00 +00:00
Yuri Victorovich
d80104a20f math/spot: Update 2.8.3 -> 2.8.4 
Reported by:	portscout
 2019-12-10 19:37:59 +00:00
Sunpoet Po-Chuan Hsieh
5975e0bd23 Make devel/openmp an optional dependency 
- Bump PORTREVISION for dependency change

It has been merged into base system since FreeBSD 11.3/12.1.
 2019-12-10 17:11:41 +00:00
Yuri Victorovich
71d16a5314 math/py-spot: Update 2.8.3 -> 2.8.4 
Reported by:	portscout
 2019-12-10 16:43:14 +00:00
Antoine Brodin
0198957bd9 Deprecate ports broken for too long 2019-12-10 09:02:42 +00:00
Mark Linimon
3d66088376 Ask for modern compiler. Ancient GCC complains with: 
cc1plus: error: unrecognized command line option "-Wno-unused-but-set-variable"

Approved by:	portmgr (tier-2 blanket)
 2019-12-09 01:33:20 +00:00
Yuri Victorovich
a5f77ce3b0 New port: math/sisl: Spline library 2019-12-08 17:18:46 +00:00
Sunpoet Po-Chuan Hsieh
05d1164a58 Update to 0.10.2 
Changes:	https://github.com/statsmodels/statsmodels/releases
 2019-12-08 17:03:38 +00:00
Sunpoet Po-Chuan Hsieh
2b6cbc6bea Update to 1.3.1 
Changes:	https://github.com/pydata/bottleneck/blob/master/RELEASE.rst
 2019-12-08 17:03:33 +00:00
Yuri Victorovich
9811603e52 math/ascent: Update 0.4.0 -> 0.5.0 
Reported by:	portscout
 2019-12-08 16:42:19 +00:00
Yuri Victorovich
cf09a485b5 math/curv: Update 0.4-333 -> 0.4-417 2019-12-08 07:11:24 +00:00
Tobias C. Berner
e162817f46 math/libnormaliz: Update to 3.8.3 
PR:		242224
Submitted by:	Lorenzo Salvadore <phascolarctos@protonmail.ch> (maintainer)
 2019-12-07 23:20:39 +00:00
Piotr Kubaj
9df980b952 math/sc-im: fix build on GCC architectures 
libxlsxwriter requires newer compiler:
/usr/local/include/xlsxwriter/workbook.h:909: error: wrong number of arguments specified for 'deprecated' attribute
 2019-12-07 15:49:01 +00:00
TAKATSU Tomonari
73d2a0216a - Update to 0.9.800.3.0 2019-12-07 12:35:09 +00:00
Yuri Victorovich
4e4b70f00c math/xtensor: Update 0.20.4 -> 0.20.10 
Reported by:	repology
 2019-12-07 06:37:44 +00:00
Yuri Victorovich
f4e2fc02db math/mandelbulber2: Update 2.19 -> 2.20 
Reported by:	portscout
 2019-12-07 05:59:19 +00:00
Devin Teske
ccf69b3175 [New Port] math/R-cran-acepack: ACE and AVAS for selecting multiple regression transformations 
acepack provides Alternative Conditional Expectations (ACE) and
Additivity Variance Stabilization (AVAS) nonparametric methods for
multiple regression transformations in R.

WWW: https://cran.r-project.org/web/packages/acepack/

Reviewed by:	imp (mentor), mat (mentor)
Approved by:	imp (mentor), mat (mentor)
Differential Revision:	https://reviews.freebsd.org/D22667
 2019-12-06 09:47:57 +00:00
Stephen Montgomery-Smith
5e7046b5f2 - Update to 1.2.2. 
- Correct license.
 2019-12-06 01:12:44 +00:00
Tobias Kortkamp
4e5aa7600c math/teyjus: Spell SHEBANG_GLOB correctly 
Drop no longer needed post-patch.
 2019-12-05 15:38:54 +00:00
Yuri Victorovich
8b867c996a New port: math/teyjus: Higher-order logic programming language Lambda Prolog 2019-12-05 04:12:20 +00:00
Mark Linimon
a001031f46 Attempt to fix failure on GCC-based systems: 
configure: error: compiler does not support C99/C++0x even with '-std=c++0x'

This is necessary but not sufficient.

Approved by:	portmgr (tier-2 blanket)
 2019-12-05 00:57:34 +00:00
Mark Linimon
8d1a3fa422 Refactor hardcoded string "llvm60" into LLVM_VER for future ease 
of maintainence.
 2019-12-04 18:20:44 +00:00
Piotr Kubaj
90a53a7fee KDE5 ports: enable WEBENGINE on powerpc64 elfv2 by default 
FreeBSD 13 soon switches to elfv2 abi on powerpc64, where qt5-webengine works.

PR:		242430
Approved by:	tcberner (maintainer, mentor)
 2019-12-04 17:39:07 +00:00
Piotr Kubaj
cc4bc87661 math/pari: fix build on powerpc64 elfv2 
Add -mminimal-toc only on elfv1, it breaks build on elfv2.

PR:		242417
Approved by:	yuri (maintainer), mentors (implicit approval)
 2019-12-04 15:46:24 +00:00
Dmitry Marakasov
e40c0b0ccd - Update to 2.3.1 
PR:		242211
Submitted by:	neel@neelc.org (maintainer)
 2019-12-04 15:02:47 +00:00
Yuri Victorovich
edeae32693 math/boolector: Update 3.0.0-239 -> 3.1.0 
Reported by:	portscout
 2019-12-04 07:18:01 +00:00
Yuri Victorovich
de497e3486 math/cadical: Add -fPIC due to the user requirement 2019-12-04 07:17:16 +00:00
Yuri Victorovich
92e8029ee7 math/geogram: Update 1.7.1 -> 1.7.2 
Reported by:	portscout
 2019-12-04 07:14:52 +00:00
Yuri Victorovich
8e6daedcfc New port: math/cadical: Simple CDCL satisfiability solver 2019-12-04 05:50:51 +00:00
TAKATSU Tomonari
250daa20d8 - Update to 1.4-5 2019-12-03 15:18:36 +00:00
Stefan Eßer
dedf444d6b Upgrade to version 2.4.0 
This versiom includes enhancements to the bundled dc command.

Approved by:	antoine (implicit)
 2019-12-03 10:22:02 +00:00
Wen Heping
8ef600fa29 - Update to 1.3.2 2019-12-03 02:34:52 +00:00
Wen Heping
b2edb6a407 - Update to 1.9.22 2019-12-03 02:29:46 +00:00
Wen Heping
78e8367614 Data structures and basic operations for ordinary sets, generalizations such as 
fuzzy sets, multisets, and fuzzy multisets, customizable sets, and intervals.

WWW: https://cran.r-project.org/web/packages/sets/
 2019-12-03 02:26:29 +00:00
Wen Heping
2911270cab - Update to 0.7.5 2019-12-03 01:41:25 +00:00
Stephen Montgomery-Smith
4bc50d71db - Fix build on powerpc64 elfv2. 
- Remove vtk5 from conflicts.
- Bump portrevision.

PR:		242361
Submitted by:	Piotr Kubaj <pkubaj@FreeBSD.org>
 2019-12-03 01:29:50 +00:00
Wen Heping
21f5c8e6a9 - Update to 0.6.24 2019-12-03 01:27:12 +00:00
Wen Heping
e37d35e829 - Update to 1.7.6 2019-12-03 01:06:06 +00:00
Wen Heping
2bc4ba4003 - Update to 1.1.2 2019-12-03 00:56:50 +00:00
Piotr Kubaj
3ec947088b math/sleef: fix build on powerpc64 elfv2 
clang doesn't find vec_nand:
In file included from /wrkdirs/usr/ports/math/sleef/work/sleef-3.4.0/src/libm/sleefsimdsp.c:145:
/wrkdirs/usr/ports/math/sleef/work/sleef-3.4.0/src/arch/helperpower_128.h:266:54: warning: implicit declaration of function 'vec_nand' is invalid in C99 [-Wimplicit-function-declaration]
static INLINE vopmask vnot_vo_vo(vopmask o) { return vec_nand(o, o); }
                                                     ^
/wrkdirs/usr/ports/math/sleef/work/sleef-3.4.0/src/arch/helperpower_128.h:266:54: error: returning 'int' from a function with incompatible result type 'vopmask' (vector of 4 'unsigned int' values)
static INLINE vopmask vnot_vo_vo(vopmask o) { return vec_nand(o, o); }
                                                     ^~~~~~~~~~~~~~

-mpower8-vector is needed because vec_nand is behind #ifdef __POWER8_VECTOR__ in clang's altivec.h.

PR:		242143
Approved by:	linimon (mentor), jmd (maintainer)
 2019-12-02 18:00:07 +00:00
Greg Lewis
8b85e3fa60 Update to 5.2.8 2019-12-02 06:16:24 +00:00
Greg Lewis
065f37c54f Update to 5.2.8 2019-12-02 06:14:00 +00:00
Stephen Montgomery-Smith
3a716b3770 - Add optional dependency math/octave-forge-matgeom. 
- Update to 20191201.
 2019-12-02 00:23:41 +00:00
Stephen Montgomery-Smith
e8126a4efc - New port math/octave-forge-matgeom. 
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.

This is matgeom.

 Geometry toolbox for 2D/3D geometric computing.

WWW: http://octave.sourceforge.net/
 2019-12-02 00:17:31 +00:00
Antoine Brodin
ec4118b5f5 Unbreak ports tree 
Pointy hat:	yuri
 2019-12-01 22:41:31 +00:00
Antoine Brodin
b6bae061b4 Unbreak ports tree 
Pointy hat:	yuri
 2019-12-01 22:38:04 +00:00
Yuri Victorovich
382a1957e9 math/py-pymc3: Update 3.7 -> 3.8 
Reported by:	portscout
 2019-12-01 17:57:20 +00:00
Yuri Victorovich
ea9191355f New port: math/py-arviz: Package for exploratory analysis of Bayesian models 2019-12-01 17:52:12 +00:00