Commit graph

38 commits

Author SHA1 Message Date
TAKATSU Tomonari
eb22ebb8f2 - Update to 0.5-74 2014-06-25 11:33:20 +00:00
Gerald Pfeifer
1cd277bdce Update the default version of GCC used in the Ports Collection from
GCC 4.6.4 to GCC 4.7.3.  This entails updating the lang/gcc port as
well as changing the default in Mk/bsd.default-versions.mk.

Part II, Bump PORTREVISIONs.

PR:		182136
Supported by:	Christoph Moench-Tegeder <cmt@burggraben.net> (fixing many ports)
Tested by:	bdrewery (two -exp runs)
2014-03-10 20:55:20 +00:00
TAKATSU Tomonari
c9dd27a71a - Update to 0.5-71 2014-02-02 13:29:58 +00:00
David Naylor
e288e58754 Convert Mk/bsd.cran.mk to the Uses framework.
PR:		ports/184699
Reviewed by:	bapt
Approved by:	portmgr (bdrewery), wen (maintainer, timeout > 2 weeks)
2013-12-28 10:28:40 +00:00
David Naylor
f62456a872 Add stage support to Mk/bsd.cran.mk and all USE_R_MOD ports (aka R-cran-*).
Since this patch converts all affected ports, bsd.cran.mk no longer supports
NO_STAGE and errors out if NO_STAGE is set.

Exp-run:	ports/184216
Reviewed by:	bdrewery
Approved by:	portsmgr, wen
2013-11-27 18:56:43 +00:00
TAKATSU Tomonari
1739d24b36 - Update to 0.5-68 2013-11-23 06:03:46 +00:00
Brendan Fabeny
1b81841d48 Update math/R to 3.0.2 patched r64207 and math/R-cran-SuppDists to 1.1-9.1;
adjust dependent ports

Reviewed by:	pfg, thierry, tota
2013-11-13 08:19:34 +00:00
Gerald Pfeifer
3be3e90f93 Update to libmpc version 1.0.1 which brings the following fixes:
- Switched to automake 1.11.6, see CVE-2012-3386.
 - #14669: Fixed extraction of CC from gmp.h.
 - Fixed case of intermediate zero real or imaginary part in mpc_fma,
   found by hydra with GMP_CHECK_RANDOMIZE=1346362345.

This is on top of the following changes from version 1.0

 - Licence change towards LGPLv3+ for the code and GFDLv1.3+ (with no
   invariant sections) for the documentation.
 - 100% of all lines are covered by tests
 - Renamed functions
   . mpc_mul_2exp to mpc_mul_2ui
   . mpc_div_2exp to mpc_div_2ui
 - 0^0, which returned (NaN,NaN) previously, now returns (1,+0).
 - Removed compatibility with K&R compilers, which was untestable due
   to lack of such compilers.
 - New functions
   . mpc_log10
   . mpc_mul_2si, mpc_div_2si
 - Speed-ups
   . mpc_fma
 - Bug fixes
   . mpc_div and mpc_norm now return a value indicating the effective
     rounding direction, as the other functions.
   . mpc_mul, mpc_sqr and mpc_norm now return correct results even if
     there are over- or underflows during the computation.
   . mpc_asin, mpc_proj, mpc_sqr: Wrong result when input variable has
     infinite part and equals output variable is corrected.
   . mpc_fr_sub: Wrong return value for imaginary part is corrected.

Convert to the new LIB_DEPENDS standard and remove hard-coded
.so versions from a couple of dependent ports.

Bump PORTREVISIONS of all dependent ports.

PR:		183141
Approved by:	portmgr (bdrewery)
2013-10-26 00:52:33 +00:00
TAKATSU Tomonari
28eeaf0f14 - Update to 0.5-65 2013-09-23 05:16:24 +00:00
Baptiste Daroussin
ce5e457020 Add NO_STAGE all over the place in preparation for the staging support (cat: math) 2013-09-20 20:55:04 +00:00
TAKATSU Tomonari
411618cf93 - Update to 0.5-64 2013-09-06 23:16:24 +00:00
TAKATSU Tomonari
622af8a36a - Update to 0.5-63 2013-09-06 11:01:02 +00:00
TAKATSU Tomonari
b885ec07ad - Update to 0.5-62 2013-08-12 01:25:59 +00:00
TAKATSU Tomonari
22748215a7 - Update to 0.5-61 2013-07-27 08:22:02 +00:00
TAKATSU Tomonari
060bff9718 - Update to 0.5-60 2013-07-06 13:05:47 +00:00
TAKATSU Tomonari
91af9acce5 - Update to 0.5-57 2013-06-22 23:12:36 +00:00
Brendan Fabeny
e80e131996 Update math/R to 3.0.1-patched, and adjust dependent ports;
synchronize math/rpy with upstream repository

Reviewed by:	wen
Approved by:	wen, tota
2013-05-28 15:15:05 +00:00
Brendan Fabeny
51cd110a01 update math/R to 2.15.3, and adjust dependent ports 2013-03-07 04:21:34 +00:00
TAKATSU Tomonari
a7d991cffb - Update to 0.5-56 2013-01-12 20:59:15 +00:00
Brendan Fabeny
3f2ca9c1d8 update the R base ports to 2.15.2 and adjust dependent ports
Reviewed by:	thierry, tota, wen
2013-01-04 17:51:39 +00:00
TAKATSU Tomonari
4e6d4d6f79 - Update to 0.5-55 2012-12-23 06:24:53 +00:00
TAKATSU Tomonari
4dc3115854 - Update to 0.5-53
Feature safe:	yes
2012-11-23 02:35:15 +00:00
TAKATSU Tomonari
0c0a23a35b - Update to 0.5-52
Feature safe:	yes
2012-11-18 17:09:17 +00:00
TAKATSU Tomonari
fb9173b18b - Update to 0.5-51
- Trim WWW: line in pkg-descr
2012-09-28 10:57:19 +00:00
TAKATSU Tomonari
98afb74307 - Update to 0.5-50
- Remove deprecated header information from Makefile
2012-09-02 14:37:52 +00:00
Carlo Strub
e9a2c0a4b1 Fix typos in COMMENT
Approved by:	portmgr@ (implicit)
2012-07-28 15:57:55 +00:00
Brendan Fabeny
3503a3164f update math/R to 2.15.1, switch to the new options format, and
adjust dependent ports
2012-06-26 23:57:00 +00:00
TAKATSU Tomonari
e859d63055 - Update to 0.5-46 2012-05-08 10:30:05 +00:00
Brendan Fabeny
aa89760550 - update math/R-cran-psych to 1.2.1 [1]
- update math/R to 2.15.0, and adjust dependent ports
- minor changes to bsd.cran.mk [2]: rename MASTER_CRAN_SITES to
  MASTER_SITE_CRAN, as in bsd.sites.mk; make the install target more
  flexible and allow CRAN ports to override it; add a regression-test
  target; set USE_FORTRAN to match math/R; remove some of the
  redundant checks of USE_R_MOD; honor NOPORTDATA and NOPORTDOCS

Reviewed by:	thierry, tota, wen
Approved by:	D. Rue (maintainer) [1], wen [2]
2012-05-04 20:56:15 +00:00
TAKATSU Tomonari
cac3ae9f82 - Update to 0.5-45
Feature safe:	yes
2012-03-21 11:49:03 +00:00
Brendan Fabeny
2dbc7784bc update math/R to 2.14.2, and adjust dependent ports 2012-03-03 16:59:36 +00:00
Brendan Fabeny
6ef707b384 update math/R to 2.14.1, and adjust dependent ports 2012-01-18 23:04:08 +00:00
TAKATSU Tomonari
4192726cf5 - Update to 0.5-43
- Fix LICENSE section

Feature safe:	yes
2011-11-28 22:06:43 +00:00
Brendan Fabeny
5d57d97db9 update math/R to 2.14.0, math/R-cran-sp to 0.9-91, and adjust
dependent ports

Approved by:	linimon (portmgr), thierry, tota, wen
Feature safe:	yes
2011-11-27 07:02:15 +00:00
TAKATSU Tomonari
8361e1265d - Move PKGNAMEPREFIX defined in each R-cran- related ports Makefile
to Mk/bsd.cran.mk

PR:		ports/162238
Submitted by:	tota (myself)
Approved by:	wen (maintainer of Mk/bsd.cran.mk and many related ports),
		David Naylor <naylor_DOT_b_DOT_david_AT_gmail_DOT_com>
		  (maintainer of math/R-cran-RSvgDevice and math/R-cran-car),
		Dan Rue <drue_AT_therub_DOT_org>
		  (maintainer of math/R-cran-psych, timeout > 2 weeks)
Feature safe:	yes
2011-11-15 20:09:02 +00:00
TAKATSU Tomonari
5f74063cef - Update to 0.5-41
Feature safe:	yes
2011-11-15 03:23:49 +00:00
Brendan Fabeny
14e140238c update math/R to 2.13.2, and adjust dependent ports 2011-10-11 14:19:46 +00:00
TAKATSU Tomonari
fc855a441b - Add a new port: math/R-cran-spdep
A collection of functions to create spatial weights matrix objects
  from polygon contiguities, from point patterns by distance and
  tesselations, for summarising these objects, and for permitting
  their use in spatial data analysis, including regional aggregation
  by minimum spanning tree; a collection of tests for spatial
  autocorrelation, including global Moran's I, APLE, Geary's C,
  Hubert/Mantel general cross product statistic, Empirical Bayes
  estimates and Assuno/Reis Index, Getis/Ord G and multicoloured join
  count statistics, local Moran's I and Getis/Ord G, saddlepoint
  approximations and exact tests for global and local Moran's I; and
  functions for estimating spatial simultaneous autoregressive (SAR)
  lag and error models, impact measures for lag models, weighted and
  unweighted SAR and CAR spatial regression models, semi-parametric
  and Moran eigenvector spatial filtering, GM SAR error models, and
  generalized spatial two stage least squares models.

  WWW:	http://cran.r-project.org/web/packages/spdep/
2011-09-18 01:38:15 +00:00