Commit graph

1406 commits

Author SHA1 Message Date
Thomas Abthorpe
49626f567a - Strip header at request of original creator
Submitted by:	trevor
With hat:	portmgr
2013-01-27 05:55:20 +00:00
Philippe Audeoud
fad40cef87 - Update to 2.32
- Changelog: http://cpansearch.perl.org/src/LDS/Bio-Graphics-2.32/Changes
2013-01-24 14:36:55 +00:00
Max Brazhnikov
81c27c891a Bump PORTREVISION after DESKTOP_ENTRIES update 2013-01-23 15:00:18 +00:00
Marcelo Araujo
05e78fe84a - Update to 9.03.
PR:		ports/172499
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
2013-01-14 08:04:38 +00:00
Max Brazhnikov
5dd37213f5 - Update DESKTOP_ENTRIES:
* rephrase Comment field or use port ${COMMENT} if appropriate
  * adjust Icon field according to the Desktop Entry Specification
  * update Categories field: remove deprecated category Application;
    set main category, if missing
- Remove indefinite article and/or rephrase COMMENT
- Trim Makefile header
- Other minor changes
2013-01-07 02:07:26 +00:00
Rene Ladan
b29162eed1 Take over maintainership.
Approved by:	pav (previous maintainer)
2012-12-28 21:59:42 +00:00
Rene Ladan
b06829187f Use the new project URL to let the application attach coorectly to the
project, and some cleanups:
- use optionsNG
- update commands in pkg-install.in
- improve %%AMD64%% comment handling
- convert Makefile header
- remove unused variable SIMAP_URL

Bump PORTREVISION

PR:		ports/174748
Submitted by:	myself
Approved by:	maintainer (pav@)
2012-12-27 20:12:06 +00:00
Andrej Zverev
14d750125f Cleanup supporting perl version 5.8 and 5.10,
lang/perl5.8 and lang/5.10 will be removed from ports tree soon.
2012-12-17 15:39:36 +00:00
Wen Heping
b7e651129e - Update to 1.5
Changes: http://cpansearch.perl.org/src/RBUELS/Bio-GFF3-1.5/Changes
2012-12-16 04:22:15 +00:00
Eitan Adler
1c155b4991 Update to 5.0.4 2012-12-14 17:47:16 +00:00
Max Brazhnikov
4beaa15d30 - Mark conflict with science/openbabel
- Trim Makefile header
2012-12-11 14:24:51 +00:00
Max Brazhnikov
5bf9bfc399 science/openbabel:
- Update openbabel to 2.3.2
- Switch to CMake build system
- Add PYTHON and CAIRO options
- Don't rename babel binary, mark conflict with ancient biology/babel

science/py-openbabel:
- Merge py-openbabel to openbabel

other:
- chase openbabel update
2012-12-11 14:19:54 +00:00
Baptiste Daroussin
db767ee750 Remove hardcoded extract dependency on diablo-jdk16, directly use USE_ZIP
instead given that jar files are just zip files, remove hardcoded do extract
target.

Reported by:	linimon, matthew
2012-12-11 07:26:38 +00:00
Baptiste Daroussin
7c354b1913 Decommissioning java 1.5 (EOLed since October 2009):
suppress any reference to JAVA_VERSION=	1.5+ (part2)
2012-12-10 13:18:28 +00:00
Baptiste Daroussin
580b0c7423 Decommissioning java 1.5 (EOLed since October 2009):
suppress any reference to USE_JAVA=	1.5+ (part1)
2012-12-10 11:25:27 +00:00
Pawel Pekala
e8c48e4d84 - Support CC properly
- Switch to PLIST_FILES
- Add option for GTK2 support

PR:		ports/174174
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Feature safe:	yes
2012-12-07 22:22:06 +00:00
Anton Berezin
c25a46dd74 Update to 2.31.
Changes: http://search.cpan.org/dist/Bio-Graphics/Changes

Feature safe:	yes
2012-12-07 13:49:15 +00:00
Ryan Steinmetz
33a2019014 - Reset MAINTAINER due to unrecoverable email bounce
Reported by:	portscout
Feature safe:	yes
2012-12-04 20:28:16 +00:00
Pietro Cerutti
a6f872f2b0 - Fix build with clang
Feature safe:	yes
2012-12-03 11:27:47 +00:00
Armin Pirkovitsch
2b222ce70c - Update to version 6.1.01
- Add MAKE_JOBS_SAFE
- Convert to optionsng
- Trim Makefile header

PR:           ports/171971
Submitted by: KATO Tsuguru <tkato432 _at_ yahoo.com>
Approved by:  beat (mentor)
Feature safe: yes
2012-12-01 00:00:43 +00:00
Armin Pirkovitsch
f50819ce60 - Update to version 5.0.2
- Add MAKE_JOBS_UNSAFE
- Convert to optionsng

PR:           ports/171970
Submitted by: KATO Tsuguru <tkato432 _at_ yahoo.com>
Approved by:  beat (mentor)
Feature safe: yes
2012-11-30 23:51:49 +00:00
Baptiste Daroussin
18210032c9 2012-11-26 benchmarks/gsbench: No more public distfiles
2012-11-26 benchmarks/xengine: No more public distfiles
2012-11-26 biology/belvu: No more public distfiles
2012-11-26 multimedia/kaffeine-mozilla: No more public distfiles
2012-11-26 www/gnustep-ticker: Abandonware
2012-11-26 net/tryst-examples: Abandonware
2012-11-26 net/tryst: Abandonware

Feature safe:	yes
2012-11-28 09:05:54 +00:00
Wen Heping
2a3cdaf773 - Update to version 2.0
- Update pkg-descr

PR:		172497
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>

Feature safe:	yes
2012-11-15 07:04:29 +00:00
Pawel Pekala
ff942cf270 - Update to version 4.4.0
- Mark MAKE_JOBS_SAFE
- Make dependency on print/pdflib optional
- Switch to PLIST_FILES

While here:
- Add missing deps
- Add desktop entry

PR:		ports/172498
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Feature safe:	yes
2012-10-30 20:31:14 +00:00
Pawel Pekala
987bb3de6b Update to version 2.12.4
PR:		ports/172218
Submitted by:	KATO Tsuguru <tkato432@yahoo.com>
Feature safe:	yes
2012-10-30 17:53:39 +00:00
Wen Heping
cb1e050008 - Reset maintainer to perl@
Feature safe:	yes
2012-10-30 02:03:29 +00:00
Wen Heping
68d3450c97 - Update to 1.4
Changes: http://cpansearch.perl.org/src/RBUELS/Bio-GFF3-1.4/Changes
- Trim Makefile headers

Feature safe:	yes
2012-10-30 01:59:37 +00:00
Wen Heping
a2845e428a - Trim Makefile headers
- Reset maintainer to perl@

Feature safe:	yes
2012-10-30 01:47:15 +00:00
Baptiste Daroussin
da6c3af5fc Deprecate a bunch of ports that are either abandonware and/or for which no more
public distfiles are available, or for which are -devel version with a more
recent stable version for long

Feature safe:	yes
2012-10-26 14:57:50 +00:00
Baptiste Daroussin
3db2e90933 2012-10-20 chinese/wangttf: No more public distfiles
2012-10-20 chinese/stardict-dict-zh_TW: No more public distfiles
2012-10-20 chinese/stardict-dict-zh_CN: No more public distfiles
2012-10-20 chinese/mingunittf: No more public distfiles
2012-10-20 chinese/dfsongsd: No more public distfiles
2012-10-20 biology/dna-qc: No more public distfiles

Feature safe:	yes
2012-10-25 23:05:56 +00:00
Wen Heping
5c73d4b55d - Update to 1.26
Changes: http://cpansearch.perl.org/src/TFRAYNER/Bio-MAGETAB-1.26/Changes

Feature safe:	yes
2012-10-25 00:18:32 +00:00
Dirk Meyer
851945b1eb - cleanup comments
Feature safe: yes
2012-10-13 13:39:56 +00:00
Wen Heping
27c347dbdd - Update to 1.5.3
- Trim Makefile headers
2012-10-08 03:17:02 +00:00
Wen Heping
baa9b66158 - Take maintainership 2012-10-01 14:55:55 +00:00
Thomas Abthorpe
d46aafc64e - Reassign to the heap at maintainer's request 2012-10-01 14:45:16 +00:00
Max Brazhnikov
ecd280d820 Add new ports biology/plink [1] and biology/plinkseq [2]:
PLINK is a free, open-source whole genome association analysis toolset.
PLINK/SEQ is an open-source C/C++ library for working with human
genetic variation data.

PR:		ports/171918 [1]
PR:		ports/171922 [2]
Submitted by:	Jason Bacon <jwbacon at tds.net>
2012-09-27 09:59:25 +00:00
Ruslan Makhmatkhanov
9f67b5e7f1 - update to 1.60
while here:
- convert Makefile header into two-line format
- update COMMENT (indefinite article removed)
- change USE_PYTHON to just -2.7
- remove py-reportlab from BUILD_DEPENDS and kick PYTHON_SITELIBDIR from there
- tab -> space change in pkg-descr:WWW

PR:		171115
Submitted by:	wen
Approved by:	Mauricio Herrera Cuadra <mauricio at arareko dot net> (maintainer)
2012-09-25 08:06:42 +00:00
Alexey Dokuchaev
bd4927ffa4 Mea culpa, s/Whom/Created by/ 2012-09-23 15:40:58 +00:00
Alexey Dokuchaev
e6bc1ecae5 - Adjust "Created by" tag to include more complete submitter's information
- Mute MKDIRs, remove trailing dot from RESTRICTED, drop leading indefinite
  article from COMMENT where appropriate
2012-09-23 15:38:58 +00:00
Thomas Abthorpe
f48ef480ea - Reassign to the heap at maintainer's request 2012-09-22 15:34:16 +00:00
Baptiste Daroussin
6b968aca1e Deprecated a bunch a ports with nor more public distfiles (thanks ehaupt's
distilator
2012-09-20 22:26:26 +00:00
Mark Linimon
3fd15ea0ae Mark as broken on sparc64: depends on thread-local storage, which is not
available on sparc64.

Hat:		portmgr
2012-09-08 08:30:39 +00:00
Baptiste Daroussin
0ff48b2c81 Fix build with clang 2012-08-24 10:18:51 +00:00
Michael Scheidell
1217f4c6f2 - Submitter is now maintainer
PR:		ports/169920
Approved by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
2012-08-07 13:54:02 +00:00
Michael Scheidell
2c946497ba - Update to version 6.903
PR:		ports/169920
Submitted by:	"Reed A. Cartwright" <cartwright@asu.edu>
Approved by:	maintainer (timeout, 21 days)
2012-08-07 12:26:39 +00:00
Koop Mast
5aa7246575 Switch from libglut to freeglut and retire libglut. Libglut hasn't been
developed in years and has been dropped from the MESA 8.0 distribution.
Freeglut is a rewrite of glut and is actively developed and is used by
many linux distributions instead of libglut.

Bump all ports that directly depend on libglut because of the shlib version
change.

There are some extra items in this patch.

*) Because freeglut doesn't have the same dependancies as libglut, some ports
	need extra dependencies added to USE_XORG to make them build.
*) Mark graphics/f90gl broken, f90gl depends on a header that is only shipped
	with libglut.
*) Remove option for libglut/freeglut selection in games/cake, only freeglut
	remains now.
*) While here fix a png related build issue games/vegastrike.

Thanks to miwi for running the exp-run.

Approved by:	portmgr (miwi)

Collaboration with:	zeising@
Obtained from:	xorg-dev staging area.
2012-08-04 22:52:02 +00:00
Carlo Strub
db5e2bc177 Fix typos in COMMENT
Approved by:	portmgr@ (implicit)
2012-07-29 11:17:02 +00:00
Carlo Strub
d5fda8cb2c Fix typos in COMMENT 2012-07-25 06:32:06 +00:00
Carlo Strub
1863cc77b0 Fix typos in COMMENT 2012-07-24 07:19:21 +00:00
Gerald Pfeifer
ebd255b2f9 Replace USE_GCC=4.4+ by USE_GCC=4.6+ since GCC 4.4 is on its way out.
Approved by:	maintainer
2012-07-21 22:20:32 +00:00