Commit graph

28 commits

Author SHA1 Message Date
Bryan Drewery
37a1520519 For the new USE_GITHUB with only GH_TAGNAME set default DISTNAME to
include GH_PROJECT/GH_ACCOUNT/GH_TAGNAME. This prevents the distfile
having the same name despite changing one of these values and causing
a bad checksum.

Differential Revision:	https://reviews.freebsd.org/D2103
Reviewed by:	mat
With hat:	bdrewery
2015-03-20 20:07:50 +00:00
Mathieu Arnold
45ca777110 Convert to new USE_GITHUB.
While there, cleanup.

Sponsored by:	Absolight
2015-03-20 09:43:20 +00:00
Adam Weinberger
9e00ce3f62 Some OCD cleanups on some of the perl@ ports.
- Remove dependencies in core
- Put testing depends in TEST_DEPENDS
- Remove unnecessary bsd.port.options.mk inclusions
- Remove checks for Perl versions that no longer exist in the ports tree
- Sort plists, some of which were so jumbled that I have to assume
  the plist was randomized before committing

A lot of the plist changes in this commit are moving PERL5_MAN3 after
SITE_PERL. It's repo churn now, but it makes updating the ports later
far easier.
2015-03-12 23:00:02 +00:00
Sunpoet Po-Chuan Hsieh
b52921dbd8 - Simplify Makefile
- Use tab instead of space
- Sort PLIST
- Pass maintainership to perl@
2015-01-18 22:49:09 +00:00
Mathieu Arnold
eee58d187e Change the way Perl modules are installed, update the default Perl to 5.18.
Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
Perl version, minimizing the upgrade when the major Perl version is changed.
It uses a version dependent directory for modules with compiled bits.

As PERL_ARCH is no longer needed in plists, it has been removed from
PLIST_SUB.

The USE_PERL5=fixpacklist keyword is removed, the .packlist file is now
always removed, as is perllocal.pod.

The old site_perl and site_perl/arch directories have been kept in the
default Perl @INC for all Perl ports, and will be phased out as these old
Perl versions expire.

PR:		194969
Differential Revision:	https://reviews.freebsd.org/D1019
Exp-run by:	antoine
Reviewed by:	perl@
Approved by:	portmgr
2014-11-26 13:08:24 +00:00
Baptiste Daroussin
99a3e8559c Cleanup plist 2014-10-20 07:10:48 +00:00
Kurt Jaeger
5b6feafc67 biology/p5-bioperl-run: 1.6.1 -> 1.6.901, unbreak, stagify 2014-08-04 08:54:10 +00:00
Baptiste Daroussin
64620e9118 Reset maintainership for ports not staged with no pending PR
With hat:	portmgr
2014-07-23 16:44:27 +00:00
Antoine Brodin
6ae01531e3 Mark BROKEN: Fails to configure
===>  Configuring for p5-bioperl-run-1.6.1_4
Invalid prerequisite condition '0/processing XML data/Bio::Tools::Run::EMBOSSacd' for XML::Twig at /usr/local/lib/perl5/site_perl/5.16/Module/Build/Base.pm line 1702.
*** [do-configure] Error code 25

Reported by:	pkg-fallout
With hat:	portmgr
2014-06-19 21:31:16 +00:00
Emanuel Haupt
094043c26a Remove trailing whitespaces from category biology 2014-02-21 13:35:26 +00:00
Emanuel Haupt
5005b67362 According to the Porter's Handbook (5.12.2.3.) default options must be added to
OPTIONS_DEFINE. This policy has been implemented only recently that's why we
have many ports violating this policy.

This patch adds the default options specified in the Porter's Handbook to
OPTIONS_DEFINE where they are being used. Ports maintained by
gnome@FreeBSD.org, kde@FreeBSD.org and x11@FreeBSD.org have been excluded.

Approved by:    portmgr (bapt)
2014-02-10 13:54:26 +00:00
Adam Weinberger
955d37365b Convert biology to MDOCS and MEXAMPLES 2014-01-03 15:46:52 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Andrej Zverev
6f12870030 - convert to the new perl5 framework
Approved by:	portmgr (bapt@, blanket)
2013-09-07 07:44:26 +00:00
Andrej Zverev
a41069ab3b - Remove SITE_PERL from *_DEPENDS
Approved by: portmgr@ (bapt@)
2012-06-30 14:53:22 +00:00
Dirk Meyer
2b74a89bc8 - update png to 1.5.10 2012-06-01 05:26:28 +00:00
Eitan Adler
c59a3834c4 At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:	portmgr
2012-01-21 17:40:15 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Dirk Meyer
de78af3ac5 - update to 1.4.1
Reviewed by:	exp8 run on pointyhat
Supported by:	miwi
2010-03-28 06:47:48 +00:00
Dirk Meyer
ca9c60461c - update to jpeg-8 2010-02-05 11:46:55 +00:00
Pav Lucistnik
4b4b7f19aa - Relax check on bioperl version; people keep forgetting to update this check
when updating bioperl port

Reported by:	pointyhat
2009-08-02 20:00:08 +00:00
Dirk Meyer
eca78ec61b - bump all port that indirectly depends on libjpeg and have not yet been bumped or updated
Requested by:	edwin
2009-07-31 13:57:52 +00:00
Martin Wilke
61dcb2fc1f - Update to 1.6.1
PR:		132122
Submitted by:	Wen Heping <wenheping@gmail.com>
Approved by:	maintainer
2009-03-19 20:54:05 +00:00
Pav Lucistnik
d508823ab5 - Unbreak after p5-bioperl changed portrevision 2009-01-15 22:47:02 +00:00
Marcelo Araujo
4aaab89f57 - Take advantage of CPAN macro from bsd.sites.mk, change ${MASTER_SITE_PERL_CPAN} to CPAN.
PR:		ports/122674
Submitted by:	Philip M. Gollucci <pgollucci@p6m7g8.com>
Reworked by:	araujo (myself)
Approved by:	portmgr (pav)
2008-04-17 14:30:31 +00:00
Mark Linimon
9839011ec3 Welcome bsd.perl.mk. Add support for constructs such as USE_PERL5=5.8.0+.
Drop support for antique perl.

Work done by:	gabor
Sponsored by:	Google Summer of Code 2007
Hat:		portmgr
2007-09-08 01:12:10 +00:00
Florent Thoumie
d4f0d0048a - Welcome X.org 7.2 \o/.
- Set X11BASE to ${LOCALBASE} for recent ${OSVERSION}.
- Bump PORTREVISION for ports intalling files in ${X11BASE}.
2007-05-19 20:36:56 +00:00
Renato Botelho
5d19d83aa6 Bioperl-run contain modules that provides a PERL interface to various
bioinformatics applications. This allows various applications to be used
with common Bioperl objects.

WWW: http://bioperl.org/

PR:		ports/93674
Submitted by:	Mauricio Herrera Cuadra <mauricio@arareko.net>
2006-05-02 21:30:08 +00:00