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Author SHA1 Message Date
Yen-Ming Lee
5f1cac9709 - update to 0.21 2009-11-07 14:19:00 +00:00
Edwin Groothuis
31675b54a2 Note that this software is not capable of IPv6 and that www/privoxy 
should be used in case that is required.
 2009-11-07 10:39:08 +00:00
Beat Gaetzi
936ab67185 - Update to 3.5.5 2009-11-07 10:33:21 +00:00
Thierry Thomas
7d3001a786 Upgrade to 3.5. 
Changelog at <http://inac.cea.fr/L_Sim/V_Sim/changelog.en.html>.
 2009-11-07 10:19:44 +00:00
Pietro Cerutti
e0f0fe1db0 - Update to 1.23 2009-11-07 10:02:28 +00:00
Boris Samorodov
d36f150c09 Connect cad/linux-eagle5 to the build. 
Forgotten by:	bsam (me)
Requested by:	linimon
 2009-11-07 09:34:31 +00:00
Mark Linimon
f0b9654a57 devel/tcl-trf is back from the Attic. 2009-11-07 04:08:44 +00:00
Mark Linimon
70f71dedb2 Re-add tcl-trf, which was brought back from the Attic. 
forgotten by:	mi
 2009-11-07 04:07:46 +00:00
Mark Linimon
49397d3084 Remove obsolete port p5-Cwd, removed from Makefile in 1.3650. 
pointy hat to:	dhn
 2009-11-07 03:39:18 +00:00
Yen-Ming Lee
2746ef7e2b - update to 0.13 2009-11-07 02:45:48 +00:00
Dmitry Marakasov
61b14afd3f - Update to 2.2.4 
PR:		139787
Submitted by:	myself
Approved by:	maintainer timeout
 2009-11-07 01:58:33 +00:00
Dmitry Marakasov
8dbd1070da Velvet is a de novo genomic assembler specially designed for short read 
sequencing technologies, such as Solexa or 454, developed by Daniel Zerbino
and Ewan Birney at the European Bioinformatics Institute (EMBL-EBI).

Citation:

Velvet: algorithms for de novo short read assembly using de Bruijn graphs.
D.R. Zerbino and E. Birney. Genome Research 18: 821-829 (2008)

WWW: http://www.ebi.ac.uk/~zerbino/velvet/

PR:		140147
Submitted by:	Motomichi Matsuzaki <mzaki@m.u-tokyo.ac.jp>
 2009-11-07 01:23:59 +00:00
Dmitry Marakasov
73e584cd3f - Update to 0.2.2 2009-11-07 00:44:34 +00:00
Yen-Ming Lee
200c7cf934 - update to 0.13 2009-11-07 00:11:47 +00:00
Yen-Ming Lee
6af946b020 - update to 0.08 2009-11-06 23:52:01 +00:00
Yen-Ming Lee
cec7b9d94f - update to 0.29 2009-11-06 23:37:46 +00:00
Yen-Ming Lee
aea18134f7 - update to 0.13 2009-11-06 23:26:23 +00:00
Yen-Ming Lee
1a7b09bde4 - update to 0.04 2009-11-06 23:14:32 +00:00
Sylvio Cesar Teixeira
d05dc8f9ac - Update to 1.2.8.3 
- Update my mail address to FreeBSD

Submitted by:	sylvio@ (myself)
Approved by:	miwi (mentor)
 2009-11-06 22:22:56 +00:00
Yen-Ming Lee
4b8a6dc90b - update to 0.11 2009-11-06 22:10:34 +00:00
Yen-Ming Lee
091718fa42 - update to 0.14 2009-11-06 21:59:39 +00:00
Dirk Meyer
2a8a0fa56c - update to 1.0.11 2009-11-06 21:45:50 +00:00
Dirk Meyer
ce15673209 - Security patch 
Security: CVE-2009-3546
Security: http://portaudit.freebsd.org/4e8344a3-ca52-11de-8ee8-00215c6a37bb.html
PR:		140335
Submitted by:	Eygene Ryabinkin
Obtained from:	PHP project
 2009-11-06 21:37:16 +00:00
Dirk Meyer
4c33f16d41 - update to 1.4 
PR:		140320
Submitted by:	Hung-Yi Chen
 2009-11-06 21:21:30 +00:00
Pav Lucistnik
03e239d5c3 - Mark BROKEN: does not patch 
Reported by:	pointyhat
 2009-11-06 21:19:35 +00:00
Pav Lucistnik
e770865796 - Mark BROKEN: does not compile 
Reported by:	pointyhat
 2009-11-06 21:17:34 +00:00
Dirk Meyer
f7ca7c18b6 - improve message for option WITH_SCTP 
PR:		140153
Submitted by:	Paul J Murphy
 2009-11-06 21:15:35 +00:00
Dirk Meyer
6eb8da82f8 - Security update to 0.9.8l 
Security: CVE-2009-3555
 2009-11-06 20:09:49 +00:00
Dirk Meyer
f2945f5b54 - update to 3.9.2 2009-11-06 19:57:51 +00:00
Gerald Pfeifer
3f30b7b6de Update to the 20091105 snapshot of GCC 4.5.0. 2009-11-06 19:19:11 +00:00
Renato Botelho
5c75053d3e Fix RUN_DEPENDS 2009-11-06 18:32:11 +00:00
Yen-Ming Lee
1e2cda6e4c - update to 2.02 
PR:		140330
Submitted by:	leeym
Approved by:	maintainer
 2009-11-06 18:17:13 +00:00
Renato Botelho
e018bbe02b Show pkg-message content, forgot on initial commit 2009-11-06 18:03:26 +00:00
Renato Botelho
792b47b5d4 Twirssi allows you to post to Twitter and Identi.ca from your favorite IRC 
client, as well as:

* Read your friend feed, and your replies (from people on and not on your feed).
* Receive and send direct messages (DMs)
* Use multiple accounts, on either twitter or identi.ca - follow, read and post
* See the context when your friends reply to users you aren't following

WWW:	http://twirssi.com/
 2009-11-06 18:01:27 +00:00
Jun Kuriyama
353119ed9e - Upgrade to 0.02. 2009-11-06 15:43:57 +00:00
Jun Kuriyama
864cdcfb36 - Upgrade to 0.02. 2009-11-06 15:11:19 +00:00
Jun Kuriyama
603fee88a0 - Upgrade to 0.30. 2009-11-06 15:08:35 +00:00
Jun Kuriyama
792a102b98 - Upgrade to 0.06. 2009-11-06 15:02:49 +00:00
Beat Gaetzi
d262fe63c6 - Disable testcases to fix possible build breakage with non default 
options set

PR:		ports/140171
Submitted by:	Hubert Tournier <hubert AT tournier.org>
Reported by:	Stanislav Dulis <stasd AT xnx.ru> (via private mail)
 2009-11-06 14:17:06 +00:00
Wen Heping
80e59f6554 Rose::DBx::Object::Renderer generates web UIs for Rose::DB::Object. 
It encapsulates many web conventions in the generated UIs as default
behaviours. For example, email addresses are by default rendered as
mailto links in tables and appropiate validation is enforced
automatically in forms. These behaviours are highly extensible.

Renderer uses CGI::FormBuilder to generate forms and the Google Chart
API to render charts. Template::Toolkit is used for template processing,
however, Renderer can dynamically generate a full set of UIs without
any templates.

WWW: http://search.cpan.org/dist/Rose-DBx-Object-Renderer
 2009-11-06 13:46:00 +00:00
Gerald Pfeifer
7a1323ac4b Update to libmpc version 0.8 which brings the following changes: 
- New functions:
   . Inverse trigonometric functions: mpc_asin, mpc_acos, mpc_atan,
     mpc_asinh, mpc_acosh, mpc_atanh
   . Power functions: mpc_pow_d, mpc_pow_ld, mpc_pow_si, mpc_pow_ui,
     mpc_pow_z, mpc_pow_fr
 - Bug fixes:
   . ui_div: real divisor
 2009-11-06 10:53:36 +00:00
Yen-Ming Lee
5587bb08d3 - update to 0.71 2009-11-06 10:00:32 +00:00
Yen-Ming Lee
8e65050ab4 - update to 3.31 2009-11-06 09:51:04 +00:00
Martin Wilke
cde69c3f13 - Fix previous commit 2009-11-06 09:43:39 +00:00
Yen-Ming Lee
fefc1f2785 - update to 1.03 2009-11-06 09:30:54 +00:00
Yen-Ming Lee
68c12aab7a - update to 1.05 2009-11-06 09:28:36 +00:00
Nicola Vitale
b4ba7bbd56 - Update to 1.6.2.1 
- Add x11-toolkits/py-gnome-extras to depends
- Add some items to the list of features in pkg-descr
 2009-11-06 09:09:56 +00:00
Philippe Audeoud
e6ce44249a - Document HTML-Parser denial of service 2009-11-06 08:22:46 +00:00
Beat Gaetzi
da7c72774f - Update to 3.5.5 2009-11-06 07:59:45 +00:00
Wen Heping
946d75d3b9 - Update to 0.22 
- Add missing dependence
 2009-11-06 07:15:15 +00:00