cumulative link models, Cox models, loglinear models, and general maximum
pseudolikelihood estimation for multistage stratified, cluster-sampled,
unequally weighted survey samples. Variances by Taylor series linearisation
or replicate weights. Post-stratification, calibration, and raking. Two-phase
subsampling designs. Graphics. PPS sampling without replacement. Principal
components, factor analysis.
WWW: http://r-survey.r-forge.r-project.org/survey/
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is zeromq.
ZeroMQ bindings for GNU Octave.
This program demonstrates the working principles of some 20 sorting
algorithms and is very easy to use. Select the algorithm, the speed
of the visualisation and whether you want to get sound output (that
reflects the values being moved and is characteristic for each kind
of algorithm).
Approved by: antoine (mentor)
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This port uses math/librsb, which is quite difficult to install. Therefore
this port will not be installed as part of the math/octave-forge meta-port.
2015-12-30 www/ocsigen: Broken for more than 6 months
2015-12-30 devel/monodevelop-database: Broken for more than 6 months
2015-12-30 lang/cduce: Broken for more than 6 months
2015-12-30 science/hdf-java: Broken for more than 6 months
2015-12-30 math/p5-Math-Geometry-Planar-GPC-Polygon: Broken for more than 6 months
2015-12-30 www/eliom: Depends on broken and expiring www/ocsigen
2015-12-30 audio/py-fastaudio: Broken for more than 6 months
2015-12-30 devel/jgoodies-common: Broken for more than 6 months
2015-12-30 graphics/pinta: Broken for more than 6 months
2015-12-30 games/kanatest: Broken for more than 6 months
2015-12-30 editors/bless: Broken for more than 6 months
2015-12-30 security/burpsuite: Broken for more than 6 months
control groups with similar covariate distributions - can be used
to match exactly on covariates, to match on propensity scores, or
perform a variety of other matching procedures.
WWW: http://gking.harvard.edu/matchit
mean, scale, and correlation structures, through mean link,
scale link, and correlation link. Can also handle clustered
categorical responses.
WWW: https://cran.r-project.org/web/packages/geepack/
declare the pre and post conditions that you code should satisfy,
while also producing friendly error messages so that your users
know what they've done wrong.
WWW: https://cran.r-project.org/web/packages/assertthat/
(such as a survey), from a time series (like variables collected for
each year in a country), or from a time-series-cross-sectional data set
(such as collected by years for each of several countries).
WWW: http://gking.harvard.edu/amelia
There are two reasons to rename this port.
1) Upstream never liked it and requested -spark be the suffix instead
2) An ongoing attempt to fix lang/spark may result in a number of slave
ports with a -spark suffix, so this keeps up consistency as all of
these ports only exist to support that port.
optimization, and related tools. It includes a unified way to
call different optimizers, and classes and methods to handle the
results from the ML viewpoint. It also includes a number of
convenience tools for testing and developing your own models.
WWW: http://www.maxlik.org/
models.At the heart of it are the vector generalized linear and
additive model (VGLM/VGAM) classes, and the book "Vector Generalized
Linear and Additive Models: With an Implementation in R" (Yee, 2015)
gives details of the statistical framework and VGAM package. Currently
only fixed-effects models are implemented, i.e., no random-effects models.
WWW: https://www.stat.auckland.ac.nz/~yee/VGAM
Estimation and inference methods for models of conditional quantiles:
Linear and nonlinear parametric and non-parametric (total variation
penalized) models for conditional quantiles of a univariate response
and several methods for handling censored survival data. Portfolio
selection methods based on expected shortfall risk are also included.
WWW: https://cran.r-project.org/web/packages/quantreg/
Some basic linear algebra functionality for sparse matrices is
provided: including Cholesky decomposition and backsolving as well
as standard R subsetting and Kronecker products.
WWW: https://cran.r-project.org/web/packages/SparseM/
Test in linear mixed effects models. Attention is on linear mixed
effects models as implemented in the lme4 package. The package
implements a parametric bootstrap test. The package implements a
Kenward-Roger modification of F-tests.
WWW: https://cran.r-project.org/web/packages/pbkrtest/
Fit linear and generalized linear mixed-effects models. The models
and their components are represented using S4 classes and methods.
The core computational algorithms are implemented using the Eigen
C++ library for numerical linear algebra and RcppEigen "glue".
WWW: https://github.com/lme4/lme4/
nloptr is an R interface to NLopt. NLopt is a free/open-source
library for nonlinear optimization, providing a common interface
for a number of different free optimization routines available
online as well as original implementations of various other algorithms.
WWW: https://cran.r-project.org/web/packages/nloptr/
2015-10-31 audio/cmus-post.fm: Broken for more than 6 months
2015-10-31 devel/libphish: Broken for more than 6 months
2015-10-31 devel/rubygem-debugger: This port is for Ruby 1.9 only. Upstream stopped maintenance.
2015-10-31 games/linux-ningpo-demo: Broken for more than 6 months
2015-10-30 graphics/gdal-grass: Superseded by gdal-2.0.0
2015-10-31 graphics/picviz: Broken for more than 6 months
2015-10-31 irc/weechat-devel: far behind stable irc/weechat (use it instead)
2015-10-31 mail/cucipop: Broken for more than 6 months
2015-10-31 math/rkward-kde4: Depends on deprecated math/R-cran-car
2015-10-31 multimedia/streamanalyze: Broken for more than 6 months
2015-10-31 net-mgmt/collectd: Please move to collectd5 - collect4 is not developed/patched
2015-10-31 sysutils/sdd: Broken for more than 6 months
2015-10-31 sysutils/xfce4-minicmd-plugin: Broken for more than 6 months
2015-10-31 www/linux-libgtkembedmoz: Broken for more than 6 months
2015-10-31 www/py-feedfinder: Broken for more than 6 months
2015-10-31 www/py-openssl-proxy: Broken for more than 6 months
2015-10-31 www/py-webware: Broken for more than 6 months
2015-10-31 www/py-webware-component: Depends on deprecated www/py-webware
2015-10-31 x11-fonts/code2001: Broken for more than 6 months
2015-10-31 x11-wm/e-module-diskio: Broken for more than 7 months
Add beignet 1.1.0.
Add clinfo, clblas, clfft and clrng.
The major change is that all Mesa ports are now configured the same way.
This fixes several problems and enables new features. The details
are described in this blog post:
http://blogs.freebsdish.org/graphics/2015/03/18/unifying-mesa-ports-configure/
The second important change is the OpenCL support. Mesa's
implementation, Clover, is enabled as well as Beignet. Clover
targets all Gallium drivers, only Radeon GPUs in our case. Beignet
is for Intel GPUs starting with Ivy Bridge. Thanks to Johannes
Dieterich, O. Hartman, and Koop Mast for their work on OpenCL! As a
bonus, there are several OpenCL-based math ports added (clblas,
clfft and clrng). For more information and known issues, please see
https://wiki.freebsd.org/Graphics/OpenCL
The third change is the removal of Mesa 9.1.7 which was installed on
FreeBSD 9.3-RELEASE. There is now only one version of Mesa in the Ports
tree (10.6.6) for all supported versions of FreeBSD.
Other, smaller changes:
* Include libosmesa into the Mesa framework; this changes libOSMesa
shlib version.
* bsd.mesalib.mk was renamed and split up in two files namely
Makefile.common and Makefile.targets. So ports can overwrite variables
set by Makefile.common and are used by Makefile.targets.
* Some text in the pkg-descr files was wrong, clean it up. While here,
update the WWW to the main mesa3d.org upstream page.
* devel/clinfo was added, a glxinfo like program but for OpenCL.
Non-x86 hardware reports are very welcome since we changed the framework
quite a bit.
Obtained from: Graphics team development repo.
Provides a framework to perform Non-negative Matrix Factorization
(NMF). The package implements a set of already published algorithms
and seeding methods, and provides a framework to test, develop and
plug new/custom algorithms. Most of the built-in algorithms have
been optimized in C++, and the main interface function provides an
easy way of performing parallel computations on multicore machines.
WWW: https://cran.r-project.org/web/packages/NMF/
This MATE is still build agains GTK+2.
Sort USES here and there.
Replace mate-dialogs with zenity and mate-calc with galculator.
This update fixes the following PR's:
PR: 193942, 191885
Submitted by: Gustau Perez <gustau.perez@gmail.com> via Gnome devel repo
Obtained from: gnome devel repo.
numbers. These utilities handle processing numbers as strings,
determining basic properties of numbers, or selecting a random number
from a range.
WWW: http://search.cpan.org/dist/Number-Misc/
with color math.
Some features include:
* Support for a wide range of color spaces. A good chunk of the CIE spaces,
RGB, HSL/HSV, CMY/CMYK, and many more.
* Conversions between the various color spaces. For example, XYZ to sRGB,
Spectral to XYZ, CIE Lab to Adobe RGB.
* Calculation of color difference. All CIE Delta E functions, plus CMC.
* Chromatic adaptations (changing illuminants).
* RGB to hex and vice-versa.
* 16-bit RGB support.
WWW: https://pypi.python.org/pypi/colormath
bitmath simplifies many facets of interacting with file sizes in various units.
Functionality includes:
- Converting between SI and NIST prefix units (kB to GiB)
- Converting between units of the same type (SI to SI, or NIST to NIST)
- Automatic human-readable prefix selection (like in hurry.filesize)
- Basic arithmetic operations (subtracting 42KiB from 50GiB)
- Rich comparison operations (1024 Bytes == 1KiB)
- bitwise operations (<<, >>, &, |, ^)
- argparse integration
- progressbar integration
- String parsing
- Sorting
WWW: https://github.com/tbielawa/bitmath
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is doctest.
The Octave-Forge Doctest package finds specially-formatted blocks of
example code within documentation files. It then executes the code and
confirms the output is correct. This can be useful as part of a testing
framework or simply to ensure that documentation stays up-to-date during
software development.
