1/2/4-byte Integer, single/double-precision Real/Complex, and Ruby Object. This
extension library incorporates fast calculation and easy manipulation of large
numerical arrays into the Ruby language. NArray has features similar to NumPy,
but NArray has vector and matrix subclasses.
WWW: http://narray.rubyforge.org/
PR: ports/187917
Submitted by: Shin-ya MURAKAMI <murashin@gfd-dennou.org>
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is divand.
This is a powerful Computer-Algebra System written in it's own version of
LISP with quite a long history behind it.
PR: ports/186855
Submitted by: Pedro Giffuni <giffunip@tutopia.com>
base representation than normal. In base n arithmetic you have n
symbols which have a representation. I was going to call them
"glyphs", but being text strings they are not really. On Tye McQueen's
whimsical suggestion I settled on the name Math::Fleximal, the set of
text representations is called a "flex", and the representation of
individual digits are the "flecks". These names are somewhat
unofficial...
This allows you to do basic arithmetic using whatever digits you want,
and to convert from one to another.
WWW: http://search.cpan.org/dist/Math-Fleximal/
Submitted by: Matthew Seaman <matthew@FreeBSD.org>
It's dedicated to trading software developers requiring to perform technical
analysis of financial market data. Alongside many indicators like ADX, MACD,
RSI, Stochastic, TRIX the candlestick pattern recognition and several vector
arithmetic and algebraic functions are present.
WWW: http://pecl.php.net/package/trader/
PR: ports/186226
Submitted by: Jim Ohlstein <jim@ohlste.in>
adds support for MEX compilation, adds a man page, and improves the user
interface using auto-admin tools.
PR: ports/184607
Submitted by: Jason Bacon <jwbacon (at) tds.net>
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is image-acquisition.
This is a port of the new VTK 6.x series. It is an early effort which should
be used with care. Python support is present but commented out, pending some
more thorough test.
WWW: http://vtk.org/
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
OpenFst is a library for constructing, combining, optimizing, and
searching weighted finite-state transducers (FSTs). Weighted finite-state
transducers are automata where each transition has an input label, an
output label, and a weight. The more familiar finite-state acceptor
is represented as a transducer with each transition's input and output
label equal. Finite-state acceptors are used to represent sets of
strings (specifically, regular or rational sets); finite-state transducers
are used to represent binary relations between pairs of strings
(specifically, rational transductions). The weights can be used to represent
the cost of taking a particular transition.
- Support JIT compilation using Clang/LLVM 3.3.
- Add desktop entry.
- Remove math/freemat-mpi. It has been marked IGNORE for almost 7 years
since the removal of MPI support in FreeMat 3.0.
2013-12-22 devel/ruby-cvs: Broken for more than 6 month
2013-12-22 devel/hs-reactive: Broken for more than 6 month
2013-12-22 databases/rubygem-delayed_job_data_mapper: Broken for more than 6 month
2013-12-22 graphics/xmagv: Broken for more than 6 month
2013-12-22 lang/slib-gauche: Broken for more than 6 month
2013-12-22 graphics/f-spot: Broken for more than 6 month
2013-12-22 sysutils/linux-megamgr: Broken for more than 6 month
2013-12-22 games/linux-savage-samuraiwars: Broken for more than 6 month
2013-12-22 ftp/gftp: Broken for more than 6 month
2013-12-22 devel/hs-DeepArrow: Broken for more than 6 month
2013-12-22 converters/py-svglib: Broken for more than 6 month
2013-12-22 converters/p5-Unicode-Lite: Broken for more than 6 month
2013-12-22 mail/squirrelmail-calendar_sql_backend-plugin: Broken for more than 6 month
2013-12-22 finance/quantlib: Broken for more than 6 month
2013-12-22 games/xkobo: Broken for more than 6 month
2013-12-22 games/quake3-rq3: Broken for more than 6 month
2013-12-22 math/fbm: No new release since 2004, new supported upstream
Fastcluster provides Python functions for hierarchical clustering. It generates
hierarchical clusters from distance matrices or from vector data.
Part of this module is intended to replace the functions
linkage, single, complete, average, weighted, centroid, median, ward
in the module scipy.cluster.hierarchy with the same functionality but much
faster algorithms. Moreover, the function 'linkage_vector' provides
memory-efficient clustering for vector data.
The interface is very similar to MATLAB's Statistics Toolbox API to make code
easier to port from MATLAB to Python/Numpy. The core implementation of this
library is in C++ for efficiency.
WWW: http://danifold.net/fastcluster.html
PR: ports/184931
Submitted by: Johannes Jost Meixner <xmj chaot.net>
Mate is a lite desktop forked from gnome2.
Most of the work is done by Jeremy Messenger (mezz@). The only thing I did
was update a few ports to later 1.6 release and attempting to keep up with
ports infra changes. Resulting bugs are all mine.
Mate is a sort of replacement for Gnome 2. So people wanting to keep a
Gnome 2 like desktop should switch. Gnome 2 will be replaced by Gnome 3
in the near future. This switch will be announce with a transition time
so people have more time to switch if they haven't already.
This release was made possible by everyone that send friendly pokes to
keep mate on my mind.
Approved by: portmgr (bapt)
Statsmodels is a Python package that provides a complement to scipy for
statistical computations including descriptive statistics and estimation and
inference for statistical models.
Main Features:
* linear regression models: GLS (including WLS and LS aith AR errors) and OLS.
* glm: Generalized linear models with support for all of the one-parameter
exponential family distributions.
* discrete: regression with discrete dependent variables, including Logit,
Probit, MNLogit, Poisson, based on maximum likelihood estimators
* rlm: Robust linear models with support for several M-estimators.
* tsa: models for time series analysis - univariate: AR, ARIMA; multivariate:
VAR and structural VAR
* nonparametric: (Univariate) kernel density estimators
* datasets: Datasets to be distributed and used for examples and in testing.
* stats: a wide range of statistical tests, diagnostics and specification tests
* iolib: Tools for reading Stata .dta files into numpy arrays, printing table
output to ascii, latex, and html
* miscellaneous models
* sandbox: statsmodels contains a sandbox folder with code in various stages of
* developement and testing which is not considered "production ready", including
Mixed models, GARCH and GMM estimators, kernel regression, panel data models.
WWW: https://www.github.com/statsmodels/statsmodels
PR: ports/183932
Submitted by: Johannes Jost Meixner <xmj chaot.net>
Patsy is a Python library for describing statistical models (especially linear
models, or models that have a linear component) and building design matrices.
Patsy brings the convenience of R "formulas" to Python.
WWW: https://www.github.com/pydata/patsy
PR: ports/183870
Submitted by: Johannes Jost Meixner <xmj chaot.net>
linear models (state space models).
Includes functions for Kalman filtering and smoothing.
Estimation of variance matrices can be performed using
the EM algorithm in case of Gaussian models.
WWW: http://cran.r-project.org/web/packages/sspir/
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is ltfat.
The Large Time/Frequency Analysis Toolbox (LTFAT) is a Matlab/Octave toolbox
for working with time-frequency analysis, wavelets and signal processing. It
is intended both as an educational and a computational tool. The toolbox
provides a large number of linear transforms including Gabor and wavelet
transforms along with routines for constructing windows (filter prototypes)
and routines for manipulating coefficients.
2013-08-27 lang/ldc-devel: Broken for more than 6 month
2013-08-27 www/mod_smooth_streaming: Broken for more than 6 month
2013-08-27 www/p5-Apache2-Scoreboard: Broken for more than 6 month
2013-08-27 sysutils/avfs: Broken for more than 6 month
2013-08-27 multimedia/mp4split: Broken for more than 6 month
2013-08-27 net-mgmt/noc: Broken for more than 6 month
2013-08-27 sysutils/empower: Broken for more than 6 month
2013-08-27 emulators/xgngeo: Broken for more than 6 month
2013-08-27 graphics/geglmm: Broken for more than 6 month
2013-08-27 sysutils/libumberlog: Broken for more than 6 month
2013-08-27 net/wizd: Broken for more than 6 month
2013-08-27 net-p2p/nicotine-plus: Broken for more than 6 month
2013-08-27 palm/barry: Broken for more than 6 month
2013-08-27 x11-themes/kde-icons-noia-warm: Broken for more than 6 month
2013-08-27 news/lottanzb: Broken for more than 6 month
2013-08-27 textproc/xaira: Broken for more than 6 month
2013-08-27 graphics/f90gl: Broken for more than 6 month
2013-08-27 multimedia/linux-gspca-kmod: Broken for more than 6 month
2013-08-27 x11/cl-clx-sbcl: Broken for more than 6 month
2013-08-27 math/dislin: Broken for more than 6 month
2013-08-27 irc/smuxi: Broken for more than 6 month
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is netcdf: A MATLAB compatible NetCDF interface for Octave.
GKmap is a free K-Map disclosure software, which is developed to solve
the Digital Electronics design problems. Along with design it also helps
in analysis of information flow in the digital circuits.
WWW: http://sourceforge.net/projects/gkmap/
PR: ports/180981
Submitted by: Javad Kouhi <javad.kouhi gmail.com>
ent applies various tests to sequences of bytes stored in files and reports the
results of those tests. The program is useful for evaluating pseudorandom
number generators for encryption and statistical sampling applications,
compression algorithms, and other applications where the information density of
a file is of interest.
WWW: http://www.fourmilab.ch/random/
PR: ports/180899
Submitted by: Horia Racoviceanu <horia@racoviceanu.com>
Unfortunately, this also affects some ports using QT3 as a GUI toolkit.
Changes to infrastructure files:
- bsd.kde.mk : obsolete, remove
- bsd.qt.mk : note that a CONFLICTS_BUILD line can probably go after a while
- CHANGES : document the removals from bsd.port.mk
- KNOBS : remove KDE and QT (KDE4 and QT4 should be used instead)
- MOVED : add the removed ports
PR: ports/180745
Submitted by: rene
Approved by: portmgr (bapt)
Exp-run by: bapt
Z-polyhedra. That is, it finds a code (e.g. in C, FORTRAN...) that
reaches each integral point of one or more parameterized polyhedra.
CLooG has been originally written to solve the code generation problem
for optimizing compilers based on the polytope model.
WWW: http://www.cloog.org/
PR: ports/177418
Submitted by: Danielo Egea Gondolfo <danilogondolfo@gmail.com>
and an installer script matlab-2012a-installer, which automates the somewhat
tricky process of installing Linux Matlab.
It requires installation media and a license file from Mathworks, Inc.
PR: ports/177724
Submitted by: Jason Bacon
Maximum likelihood estimation of the parameters of a fractionally
differenced ARIMA(p,d,q) model (Haslett and Raftery, Appl.Statistics,
1989).
WWW: http://cran.r-project.org/web/packages/fracdiff/
Methods and tools for displaying and analysing univariate time
series forecasts including exponential smoothing via state space
models and automatic ARIMA modelling.
WWW: http://cran.r-project.org/web/packages/forecast/
There is an existing port (finance/gss) with possible distfile conflict however
upstream is not actively maintained and CRAN packages have a slightly different
naming scheme making a future distfiles conflict unlikely.
Approved by: eadler,bdrewery (mentors, implicit)
good balance between speed and ease of use. The syntax is deliberately
similar to Matlab.
Integer, floating point and complex numbers are supported, as well as a
subset of trigonometric and statistics functions. Various matrix
decompositions are provided through optional integration with LAPACK, or
one of its high performance drop-in replacements (such as the
multi-threaded MKL or ACML libraries).
A delayed evaluation approach is employed (at compile-time) to combine
several operations into one and reduce (or eliminate) the need for
temporaries. This is accomplished through recursive templates and template
meta-programming.
Useful for conversion of research code into production environments, or if
C++ has been decided as the language of choice, due to speed and/or
integration capabilities.
WWW: http://arma.sourceforge.net/
PR: ports/177166
Submitted by: Pedro Giffuni <giffunip@tutopia.com>
This port contains data and baseline images for VTK regression testing
and other VTK examples. The Data directory are data files of various
types. This includes polygonal data, images, volumes, structured grids,
rectilinear grids, and multi-variate data.
The Baseline are the testing images. These are used in testing to compare
a valid image against a generated image. If a difference between the two
images is found, then the test is considered to have failed.
WWW: http://www.vtk.org/
union, difference and xor) on polygons in 2D space. There are no
restrictions on either the number nor the type of polygon that can be
clipped. They can have holes, be self-intersecting and even have coincident
edges. The library also performs polygon offsetting
WWW: http://www.angusj.com/delphi/clipper.php
PR: ports/175845
Submitted by: Martin Dieringer <martin.dieringer@gmx.de>
graphics/py-visual||2013-02-06|Has expired: Depends on the expired x11-toolkits/gtkglarea [1]
math/gnuplot+||2013-02-06|Upstream says: This package is obsolete. The author does not recommend to use it
science/vis5d+||2013-02-06|No new release since 2001, depends on expired x11-toolkits/gtkglarea [2]
Approved by: stephen [1],
nivit [2]
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is database: interface to SQL databases, currently only postgresql using
libpq.
A collection and description of functions to compute density,
distribution and quantile function and to generate random variates
of the stable distribution.
WWW: http://cran.r-project.org/web/packages/stabledist/
PR: ports/172298 (based on)
Submitted by: David Naylor <naylor.b.david_AT_gmail_DOT_com>
This routine implements the dual method of Goldfarb and Idnani
(1982, 1983) for solving quadratic programming problems of the form
min(?dT b + 1/2bT Db) with the constraints AT b >= b0.
WWW: http://cran.r-project.org/web/packages/quadprog/
PR: ports/172298 (based on)
Submitted by: David Naylor <naylor.b.david_AT_gmail_DOT_com>
Simulations and estimations of discrete, univariate or multivariate
gaussian, mixture of univariate or multivariate gaussian hidden
Markov models.
WWW: http://r-forge.r-project.org/projects/rhmm/
Feature safe: yes
2012-11-26 games/stepbill: No more public distfiles
2012-11-26 deskutils/ktagebuch: No more public distfiles
2012-11-26 games/jetpack: No more public distfiles
2012-11-26 games/tremor: No more public distfiles
2012-11-26 graphics/jpeg2pdf: No more public distfiles
2012-11-26 java/westhawksnmp: No more public distfiles
2012-11-26 japanese/tcl76: No more public distfiles
2012-11-26 math/stepulator: No more public distfiles
2012-11-26 editors/jedit-devel: Stable version is more recent than devel
2012-11-26 www/trac-wikirename: Functionality of this plugin is included in the Trac core since 0.12
Feature safe: yes
2012-11-27 devel/jakarta-commons-chain: Depends on the expired devel/portlet-api
2012-11-27 math/p5-Math-LinearCombination: Depends on the expired p5-Class-Field
2012-11-26 x11/padkey: No more public distfiles
2012-11-26 japanese/gicq: No more public distfiles and development ceased
2012-11-26 www/momspider: No more public distfiles
2012-11-26 japanese/perl5: Recent perl supports correctly japanese, consider using them
2012-11-26 sysutils/fuser: No more public distfiles
2012-11-26 textproc/ascii2pdf: No more public distfiles
Feature safe: yes
LearnBayes contains a collection of functions helpful in learning
the basic tenets of Bayesian statistical inference. It contains
functions for summarizing basic one and two parameter posterior
distributions and predictive distributions. It contains MCMC
algorithms for summarizing posterior distributions defined by the
user. It also contains functions for regression models, hierarchical
models, Bayesian tests, and illustrations of Gibbs sampling.
WWW: http://cran.r-project.org/web/packages/LearnBayes/
Feature safe: yes
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions
and extensions for GNU Octave. contains the source for all the functions
plus build and install scripts.
This is cgi, which provides a common gatway interface for Octave.
Feature safe: yes
This package contains functions to perform Bayesian inference using
posterior simulation for a number of statistical models. Most
simulation is done in compiled C++ written in the Scythe Statistical
Library Version 1.0.3. All models return coda mcmc objects that can
then be summarized using the coda package. MCMCpack also contains
some useful utility functions, including some additional density
functions and pseudo-random number generators for statistical
distributions, a general purpose Metropolis sampling algorithm, and
tools for visualization.
WWW: http://cran.r-project.org/web/packages/MCMCpack/
Feature safe: yes
OpenBLAS is an optimized BLAS library based on GotoBLAS2 1.13 BSD version.
OpenBLAS is an open source project supported by
Lab of Parallel Software and Computational Science, ISCAS.
NOTE: If you want to specify your CPU microarchitecture manually,
please use TARGET_CPU_ARCH knob, e.g., "make TARGET_CPU_ARCH=NEHALEM".
This value is set TARGET build flag.
WWW: https://github.com/xianyi/OpenBLAS
PR: 165684
Submitted by: Eijiro Shibusawa <phd_kimberlite@yahoo.co.jp>
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is lssa.
A package implementing tools to compute spectral decompositions of
irregularly-spaced time series. Currently includes functions based off the
Lomb-Scargle periodogram and Adolf Mathias' implementation for R and C (see
http://www.jstatsoft.org/v11/i02).
WWW: http://octave.sourceforge.net/
graphics software based on the OpenGL Shading Language (GLSL) specification.
GLM provides classes and functions designed and implemented with the same
naming conventions and functionalities than GLSL so that when a programmer
knows GLSL, he knows GLM as well which makes it really easy to use.
modelling, fitting, analysis and forecasting of Generalized Dynamic Linear
Models (DLMs). It includes functions to name and extract individual components
of a DLM, build classical seasonal time-series models (monthly, quarterly,
yearly, etc. with calendar adjustments) and provides a unified interface
compatible with other state-space packages including: dlm, FKF and KFAS.
WWW: http://cran.r-project.org/web/packages/dlmodeler/
PR: 170069
Submitted by: Cyrille Szymanski <cnszym@gmail.com>
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is ncarray.
Access a single or a collection of NetCDF files as a multi-dimensional array.
CONFLICTS, LATEST_LINK, and PORTSCOUT; adjust dependent ports; explicitly
note the restrictive license of the metis ports (while here, append the MPI port to
*DEPENDS in math/parmetis, rather than using an assignment)
PR: 169578
Math::GMPz is a bignum module utilising the GNU MP (GMP) library. Basically this
module simply wraps all of the mpz integer functions provided by that library.
See the Math::GMPz test suite for some examples of usage.
WWW: http://search.cpan.org/dist/Math-GMPz/
Math::GMPq is a bigrational module utilising the GNU MP (GMP) library. Basically
this module simply wraps all of the mpq rational functions provided by that
library. See the Math::GMPq test suite for some examples of usage.
IMPORTANT:
If your perl was built with '-Duse64bitint' you need to assign all integers
larger than 52-bit in a 'use integer;' block. Failure to do so can result in the
creation of the variable as an NV (rather than an IV) - with a resultant loss of
precision.
WWW: http://search.cpan.org/dist/Math-GMPq/
Math::GMPf is a bigfloat module utilising the GNU MP (GMP) library. Basically
this module simply wraps all of the mpf floating point functions provided by
that library. See the Math::GMPf test suite for some examples of usage.
WWW: http://search.cpan.org/dist/Math-GMPf/
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is java, and provides a Java interface with OO-like Java objects
manipulation.
Please note that port revision for all the Haskell ports without version changes
are also bumped. Other per-port updates are coming soon (in separate commits)!
In addition to that, separate -docs ports are no longer needed so they are
now removed.
Thanks ashish@ for the assistance.
Obtained from: FreeBSD Haskell
statistics components addressing the most common problems not available in the
Java programming language or Commons Lang.
WWW: http://jakarta.apache.org/commons/math/
PR: ports/166398
Submitted by: Muhammad Moinur Rahmanh <5u623l20@gmail.com>
2012-05-10 archivers/php4-zlib: php4 is EOLed
2012-05-10 converters/php4-iconv: php4 is EOLed
2012-05-10 converters/php4-mbstring: php4 is EOLed
2012-05-10 converters/php4-recode: php4 is EOLed
2012-05-10 databases/php4-dba: php4 is EOLed
2012-05-10 databases/php4-dbase: php4 is EOLed
2012-05-10 databases/php4-dbx: php4 is EOLed
2012-05-10 databases/php4-filepro: php4 is EOLed
2012-05-10 databases/php4-interbase: php4 is EOLed
2012-05-10 databases/php4-mssql: php4 is EOLed
2012-05-10 databases/php4-mysql: php4 is EOLed
2012-05-10 databases/php4-odbc: php4 is EOLed
2012-05-10 databases/php4-oracle: php4 is EOLed
2012-05-10 databases/php4-pgsql: php4 is EOLed
databases/php4-rrdtool: php4 is EOLed
2012-05-10 databases/php4-sybase_ct: php4 is EOLed
2012-05-10 devel/php4-dio: php4 is EOLed
2012-05-10 devel/php4-gettext: php4 is EOLed
2012-05-10 devel/php4-mcve: php4 is EOLed
2012-05-10 devel/php4-ncurses: php4 is EOLed
2012-05-10 devel/php4-pcntl: php4 is EOLed
2012-05-10 devel/php4-pcre: php4 is EOLed
2012-05-10 devel/php4-readline: php4 is EOLed
2012-05-10 devel/php4-shmop: php4 is EOLed
2012-05-10 devel/php4-sysvmsg: php4 is EOLed
2012-05-10 devel/php4-sysvsem: php4 is EOLed
2012-05-10 devel/php4-sysvshm: php4 is EOLed
2012-05-10 devel/php4-tokenizer: php4 is EOLed
2012-05-10 finance/php4-pfpro: php4 is EOLed
2012-05-10 ftp/php4-curl: php4 is EOLed
2012-05-10 ftp/php4-ftp: php4 is EOLed
2012-05-10 graphics/php4-chartdirector: php4 is EOLed
2012-05-10 graphics/php4-exif: php4 is EOLed
2012-05-10 graphics/php4-gd: php4 is EOLed
lang/php4: php4 is EOLed
2012-05-10 lang/php4-extensions: php4 is EOLed
2012-05-10 lang/php4-overload: php4 is EOLed
2012-05-10 mail/php4-imap: php4 is EOLed
2012-05-10 math/php4-bcmath: php4 is EOLed
2012-05-10 math/php4-gmp: php4 is EOLed
2012-05-10 misc/php4-calendar: php4 is EOLed
2012-05-10 misc/php4-mcal: php4 is EOLed
2012-05-10 net/php4-ldap: php4 is EOLed
2012-05-10 net/php4-sockets: php4 is EOLed
2012-05-10 net/php4-xmlrpc: php4 is EOLed
2012-05-10 net/php4-yp: php4 is EOLed
2012-05-10 net-mgmt/php4-snmp: php4 is EOLed
2012-05-10 security/php4-crack: php4 is EOLed
2012-05-10 security/php4-mcrypt: php4 is EOLed
2012-05-10 security/php4-mhash: php4 is EOLed
2012-05-10 security/php4-openssl: php4 is EOLed
2012-05-10 sysutils/php4-posix: php4 is EOLed
2012-05-10 textproc/php4-ctype: php4 is EOLed
2012-05-10 textproc/php4-domxml: php4 is EOLed
2012-05-10 textproc/php4-pspell: php4 is EOLed
2012-05-10 textproc/php4-wddx: php4 is EOLed
2012-05-10 textproc/php4-xml: php4 is EOLed
2012-05-10 textproc/php4-xslt: php4 is EOLed
2012-05-10 www/php4-session: php4 is EOLed
2012-05-10 archivers/pecl-zip: php4 is EOLed
2012-05-10 databases/pecl-sqlite: php4 is EOLed
2012-05-11 devel/pear-XML_XPath: php4 is EOLed
2012-05-11 devel/pecl-json: php4 is EOLed
2012-05-10 www/pecl-tidy: php4 is EOLed
2012-05-10 www/php-dyn: php4 is EOLed
2012-05-11 security/pecl-hash: php4 is EOLed
2012-05-11 net/phpldapadmin098: php4 is EOLed
graphics/jpgraph: php4 is EOLed
Implements a number of axis labeling schemes, including those
compared in An Extension of Wilkinson's Algorithm for Positioning
Tick Labels on Axes by Talbot, Lin, and Hanrahan, InfoVis 2010.
WWW: http://cran.r-project.org/web/packages/labeling/
Viper is a minimalistic scientific plotter and run-time visualization module.
Viper has support for visualizing meshes and solutions in DOLFIN.
WWW: https://launchpad.net/fenics-viper
PR: ports/166913
Submitted by: jwbacon@tds.net
The Unified Form Language (UFL) is a domain specific language for declaration
of finite element discretizations of variational forms.
WWW: https://launchpad.net/ufl
PR: ports/166911
Submitted by: jwbacon@tds.net
The FInite element Automatic Tabulator FIAT supports generation of arbitrary
order instances of the Lagrange elements on lines, triangles, and tetrahedra.
WWW: https://launchpad.net/fiat
PR: ports/166910
Submitted by: jwbacon@tds.net
the evaluation of a multilinear form given in mathematical notation.
WWW: https://launchpad.net/ffc
PR: 166700
Submitted by: Jason Bacon <jwbacon@tds.net>
gnuplot to produce fig output and then mangle it to fill in the bars. Any number
of clustered datasets are supported, as well as automatic averaging and other
features.
WWW: http://www.burningcutlery.com/derek/bargraph/
PR: ports/166410
Submitted by: Dereckson <dereckson@gmail.com>
Approved by: wen@ (co-mentor)
Feature safe: yes
- add and update URLs of MASTER_SITES
- update author's email address
- use @dirrmtry
- change port category from math to science.
- Completes repo copy from math/ruby-netcdf -> science/ruby-netcdf
PR: ports/165314
Submitted by: Shin-ya Murakami <murashin@gfd-dennou.org>
Carve is a C++ library designed to perform boolean operations between two
arbitrary polygonal meshes. The standard union and intersection operations
are supported, as are symmetric and asymmetric difference. It is also
possible to implement custom operations using Carve, allowing results to be
formed from any combination of inputs.
Carve supports a variety of inputs, including both closed and open surfaces,
faces with arbitrary edge counts and datasets with multiple disjoint,
embedded or touching surfaces. Carve can also interpolate arbitrary values
across faces, meaning that CSG operations need not discard colour, texture
coordinates or other data.
WWW: http://code.google.com/p/carve/
Package KFAS provides funchtions for Kalman filtering, state,
disturbance and simulation smoothing, forecasting and simulation
of state space models. All functions can use exact diffuse
initialisation when distributions of some or all elements of initial
state vector are unknown. Filtering, state smoothing and simulation
functions use sequential processing algorithm, which is faster than
standard approach, and it also allows singularity of prediction
error variance matrix. KFAS also contains function for computing
the likelihood of exponential family state space models and function
for state smoothing of exponential family state space models.
WWW: http://cran.r-project.org/web/packages/KFAS/
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
The queueing toolbox provides functions for queueing networks and Markov
chains analysis. This package can be used to compute steady-state performance
measures for open, closed and mixed networks with single or multiple job
classes. Mean Valud Analysis (MVA), convolution and various bounding
techniques are implemented. Various transient and steady-state performance
measures for Markov chains can als be computed (including state occupancy
probabilities, mean time to absorption, time-averaged sojourn times), both
for continuous-time and discrete-time chains.
One of the aims of this package is to make life easier for useRs
who deal with survey data sets. It provides an infrastructure for
the management of survey data including value labels, definable
missing values, recoding of variables, production of code books,
and import of (subsets of) SPSS and Stata files. Further, it provides
functionality to produce tables and data frames of arbitrary
descriptive statistics and (almost) publication-ready tables of
regression model estimates. Also some convenience tools for graphics,
programming, and simulation are provided.
WWW: http://www.martin-elff.net/software/memisc/
devel/pure-readline: A readline interface for the Pure language
devel/pure-stldict: Pure interface to C++ STL map/unordered_map
devel/pure-stlvec: Pure interface to C++ STL vector
math/pure-mpfr: Multiprecision floats for Pure
x11-toolkits/pure-tk: A basic interface between Pure and Tcl/Tk
PR: ports/161799
Submitted by: Zhihao Yuan <lichray@gmail.com>
Sage is a free open-source mathematics software system licensed under the GPL.
It combines the power of many existing open-source packages into a common
Python-based interface.
Mission: Creating a viable free open source alternative to Magma, Maple,
Mathematica and Matlab.
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is dicom. Digital communications in medicine (DICOM) file io. Depends on
Grassroots DICOM (GDCM).
4.7.2. The official release notes can be found at:
http://kde.org/announcements/announce-4.7.2.php
This release ships with many improvements. Read more about them here:
http://FreeBSD.kde.org/news.php#itemKDESC472availableinports
We'd like to say thanks to all testers and contributors, especially to
lwhsu@ for his effort on hosting our test packages.
PR: 156293 [1]
159219 [2]
160164 [3]
Submitted by: Oleg Sidorkin <osidorkin@gmail.com> [1]
Alvaro Castillo <gobledb@gmail.com> [2]
dkeav04@gmail.com [3]
Tested by: exp-run via pav
astro/gkrellsun Abandonware
astro/xrmap No more distfiles
audio/midimountain Abandonware
audio/gkrellmss Abandonware
audio/gnapster Abandonware
databases/xbase No more public distfiles
databases/xbsql No more public distfiles
games/gtkabale No more public distfiles
games/battleball No more public distfiles, does not compile on ia64 or sparc64
games/race No more public distfiles
games/stvef-paks No more public distfiles
games/stvef-server No more public distfiles
games/tome No more public distfiles
games/qkmj No more public distfiles
games/oilwar No more public distfiles
games/xbaby No more public distfiles
games/xword Abandonware
games/kslide No more public distfiles
graphics/xmrm No more public distfiles, does not compile on amd64 or sparc64
graphics/giftrans Upstream disappeared and distfile is not available
graphics/wildmagic BROKEN for more than 6 months, does not fetch
irc/ircd-rusnet No more public distfiles
irc/tkirc No more public distfiles
korean/mizifont No more public distfiles
lang/freetxl No more public distfiles
math/nsc2ke No more public distfiles
misc/mgp-mode.el No more public distfiles
multimedia/p5-RIFF-Info No more public distfiles
net/p5-Net-OpenDHT No more public distfiles
net/mudix No more public distfiles
net-im/newsbot No more public distfiles
net-im/libicq2000 Abandonware
net-im/gossip No longer maintain by upstream, use net-im/empathy instead
net-im/ickle Abandonware
net-mgmt/nipper BROKEN for more than 6 month, does not fetch
net-p2p/mldonkey-serverspy No more public distfiles
news/p5-Gateway No more public distfiles
print/epsmerge No more public distfiles
science/at No more public distfiles
science/pyvox No more public distfiles
security/p5-Email-Obfuscate No more public distfiles
security/libparanoia No more public distfiles
security/execwrap No more public distfiles
vulnerabilities listed in portaudit, and those
that depend on them - part 1
math/mupad
Relies on xpm, vulnerable since 2004-09-15
net-p2p/torrentflux
Vulnerable since 2006-10-07
net/tptest
Vulnerable since 2009-12-17
security/pgp6
Vulnerable since 2005-07-31
www/p5-RTx-RightsMatrix
Only works with www/rt36, which is FORBIDDEN
www/p5-RTx-Shredder
Only works with www/rt36, which is FORBIDDEN
www/p5-RTx-Statistics
Only works with www/rt36, which is FORBIDDEN
www/plone
Vulnerable since 2011-02-10
www/pyblosxom
Vulnerable since 2009-02-11
www/rt36
Vulnerable since 2009-12-09
www/zope-archetypes
Depends on www/plone, which is FORBIDDEN
www/zope-calendaring
Depends on www/plone, which is FORBIDDEN
www/zope-coreblog2
Depends on www/plone, which is FORBIDDEN
www/zope-i18nlayer
Depends on www/plone, which is FORBIDDEN
www/zope-plonelanguagetool
Depends on www/plone, which is FORBIDDEN
www/zope-simpleblog
Depends on www/plone, which is FORBIDDEN
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is mechanics.
Library with functions useful for numerical computation in classical mechanics.
The octave-forge package is the result of The GNU Octave Repositry project,
which is intended to be a central location for custom scripts, functions and
extensions for GNU Octave. contains the source for all the functions plus
build and install scripts.
This is geometry.
Library for geometric computing extending MatGeom functions. Useful to create, transform, manipulate and display geometric primitives.
Math::Prime::XS detects and calculates prime numbers by either applying Modulo
operator division, the Sieve of Eratosthenes, a Summation calculation or Trial
division.
WWW: http://search.cpan.org/dist/Math-Prime-XS/
A collection of functions to create spatial weights matrix objects
from polygon contiguities, from point patterns by distance and
tesselations, for summarising these objects, and for permitting
their use in spatial data analysis, including regional aggregation
by minimum spanning tree; a collection of tests for spatial
autocorrelation, including global Moran's I, APLE, Geary's C,
Hubert/Mantel general cross product statistic, Empirical Bayes
estimates and Assuno/Reis Index, Getis/Ord G and multicoloured join
count statistics, local Moran's I and Getis/Ord G, saddlepoint
approximations and exact tests for global and local Moran's I; and
functions for estimating spatial simultaneous autoregressive (SAR)
lag and error models, impact measures for lag models, weighted and
unweighted SAR and CAR spatial regression models, semi-parametric
and Moran eigenvector spatial filtering, GM SAR error models, and
generalized spatial two stage least squares models.
WWW: http://cran.r-project.org/web/packages/spdep/
