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14 commits

Author SHA1 Message Date
Dmitry Marakasov
4d4b259bcd - Add NO_ARCH 
Approved by:	portmgr blanket
 2015-05-31 13:37:20 +00:00
Mathieu Arnold
eee58d187e Change the way Perl modules are installed, update the default Perl to 5.18. 
Before, we had:

  site_perl :           lib/perl5/site_perl/5.18
  site_perl/perl_arch : lib/perl5/site_perl/5.18/mach
  perl_man3 :           lib/perl5/5.18/man/man3

Now we have:

  site_perl : lib/perl5/site_perl
  site_arch : lib/perl5/site_perl/mach/5.18
  perl_man3 : lib/perl5/site_perl/man/man3

Modules without any .so will be installed at the same place regardless of the
Perl version, minimizing the upgrade when the major Perl version is changed.
It uses a version dependent directory for modules with compiled bits.

As PERL_ARCH is no longer needed in plists, it has been removed from
PLIST_SUB.

The USE_PERL5=fixpacklist keyword is removed, the .packlist file is now
always removed, as is perllocal.pod.

The old site_perl and site_perl/arch directories have been kept in the
default Perl @INC for all Perl ports, and will be phased out as these old
Perl versions expire.

PR:		194969
Differential Revision:	https://reviews.freebsd.org/D1019
Exp-run by:	antoine
Reviewed by:	perl@
Approved by:	portmgr
 2014-11-26 13:08:24 +00:00
Baptiste Daroussin
99a3e8559c Cleanup plist 2014-10-20 07:10:48 +00:00
Martin Wilke
6f0f3362e8 - Stage support 2014-01-31 12:47:06 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Mathieu Arnold
4819ca343b - Convert to new perl framework 
- Trim Makefile header
- Remove MAKE_JOBS_SAFE=yes, it's the default.
 2013-08-02 18:52:07 +00:00
Eitan Adler
5190f14f8d For perl@ owned ports: 
- Fix COMMENT
- Trim header
 2013-03-29 00:44:53 +00:00
Sunpoet Po-Chuan Hsieh
69210a7789 - Update to 0.78 
- Sort TEST_DEPENDS, MAN1, MAN3 and PLIST

Changes:	http://search.cpan.org/dist/Bio-NEXUS/doc/changes.txt
 2012-02-11 02:04:41 +00:00
Wen Heping
58000f342c - Update to 0.77 2012-02-09 01:23:59 +00:00
Eitan Adler
c59a3834c4 At the moment 1385 ports use BUILD_DEPENDS= ${RUN_DEPENDS} and 450 
ports use BUILD_DEPENDS:= ${RUN_DEPENDS}. This patch fixes ports that are
currently broken. This is a temporary measure until we organically stop using
:= or someone(s) spend a lot of time changing all the ports over.

Explicit duplication > := > = and this just moves ports one step to the left

Approved by:	portmgr
 2012-01-21 17:40:15 +00:00
Sunpoet Po-Chuan Hsieh
a32defea5d - Use canonical format for FreeBSD.org MAINTAINER addresses 
- Remove obsolete MD5 checksum while I'm here

PR:		ports/152844
Submitted by:	sunpoet (myself)
Approved by:	miwi (with portmgr hat)
 2010-12-25 16:55:41 +00:00
Wen Heping
c0d7b4a1e1 - Update to 0.76 2010-09-25 08:14:02 +00:00
Wen Heping
40365a66b5 - Update to 0.75 
- Reset maintainer to perl@
 2010-09-07 07:15:24 +00:00
Martin Wilke
cb1a940d17 Bio::NEXUS package provides an object-oriented, Perl-based 
applications programming interface (API) to the NEXUS file
format of Maddison, et al., 1997 (Syst. Biol. 46:590-621).
NEXUS is a powerful and extensible format designed for use
in evolutionary analysis, including the analysis of molecular
sequence data as well as classical morphological and life-history
data. NEXUS is the input or output format for software such as
PAUP*, MacClade, Mesquite, SIMMAP, MrBayes, Nexplorer, and
so on.  This package also contains the demonstration applications
nexplot.pl (plot character data with a tree) and nextool.pl
(allowing programmatic editing, e.g., selecting particular
clades or subsets of data).

WWW: http://search.cpan.org/dist/Bio-NEXUS/

PR:		ports/137983
Submitted by:	Wen Heping <wenheping at gmail.com>
 2009-08-22 20:39:51 +00:00