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33 commits

Author SHA1 Message Date
Dmitry Marakasov
5ae457bc49 - Remove deprecated option 
- Tweak compiler flags
- Add LICENSE
- Pass maintainership to submitter

PR:		199066
Submitted by:	jwbacon@tds.net
 2015-04-02 15:41:31 +00:00
Baptiste Daroussin
99a3e8559c Cleanup plist 2014-10-20 07:10:48 +00:00
Adam Weinberger
e7e692da08 Add DOCS to OPTIONS_DEFINE to ports that check for PORT_OPTIONS:MDOCS. 
While here, use OPTIONS helpers and re-enable manpage installation.
 2014-07-15 14:54:54 +00:00
Antoine Brodin
9d9aec7824 Stage support 2013-12-30 18:08:14 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Andrej Zverev
99ad912735 - Convert to new perl framework 
- Trim Makefile header
 2013-08-03 08:45:51 +00:00
Wen Heping
c65306f29b - Update to 3.0 
- Convert to optionsNG
- Drop maintainership
 2013-07-20 15:08:45 +00:00
Wen Heping
baa9b66158 - Take maintainership 2012-10-01 14:55:55 +00:00
Thomas Abthorpe
d46aafc64e - Reassign to the heap at maintainer's request 2012-10-01 14:45:16 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Philip M. Gollucci
76b1b59c33 - Update download locations, update WWW 
Reported by:    -fetch-original pointyhat run
 2009-02-01 08:17:14 +00:00
Edwin Groothuis
acd87b4ad8 SHA256ify 
Approved by:    krion@
 2006-01-22 08:34:46 +00:00
Sergey Matveychuk
5275953004 - Remove a junk white space. 2004-11-25 22:58:29 +00:00
Sergey Matveychuk
3b19501744 - Update to 2.3.2 
- Add WITH_PVM knob
- Pass maintainership to submitter

PR:		ports/74331
Submitted by:	Fernan Aguero <fernan(at)iib.unsam.edu.ar>
 2004-11-25 22:35:52 +00:00
Mark Linimon
e22ed3d655 With portmgr hat on, reset inactive maintainer. These ports are now up 
for adoption.
 2004-11-20 08:09:49 +00:00
Trevor Johnson
8232e82f85 SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
Sergey A. Osokin
958842c5c6 Cosmetic fix: use %%DOCSDIR%% macro. 
No functionally changes.

Submitted by:	Oleg Karachevtsev <ok@etrust.ru>
A part of PR:	57992
 2003-10-22 09:37:18 +00:00
Ade Lovett
7e52725f2a Clear moonlight beckons. 
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.
 2003-03-07 06:14:21 +00:00
Johann Visagie
72f20def8c - Add patch that will, for -CURRENT only, change: -pthread -> -lc_r 
- Bump $PORTREVISION

Prompted by:	Various questions from Rune Linding <linding@EMBL-Heidelberg.DE>
 2002-07-11 10:52:14 +00:00
Johann Visagie
4e8aeac440 - Update port to version 2.2g 2001-08-22 13:18:10 +00:00
Johann Visagie
7ddb2910c6 - General clean-up of port. 
- Install PDF and HTML documentation.
- Take over maintainership.

Approved by:	Silence from previous maintainer; no objections from -ports
 2001-07-05 08:58:12 +00:00
Johann Visagie
819158bfa4 - Add %%PORTDOCS%% support to pkg-plist. 
- $INSTALL_MAN -> $INSTALL_DATA in Makefile where appropriate.

PR:		28668
Submitted by:	Patrick Li <pat@databits.net>
 2001-07-04 12:16:13 +00:00
Michael Haro
a0cb9ec98b update with the new PORTNAME/PORTVERSION variables 2000-04-08 22:04:57 +00:00
Michael Haro
6ba32b931f fix some pkg/MESSAGE stuff 2000-01-29 20:01:39 +00:00
David E. O'Brien
fe1e09a6cc Change Id->FreeBSD. 1999-08-25 04:58:03 +00:00
Tim Vanderhoek
748713c3f6 As threatened, enforce the "Capital, no period" rule. Ellipses are 
permitted.  Note that, given current numeric motif of PW, this is done
in four equally-sized commits of 393 files each.
 1999-06-26 17:19:19 +00:00
Tim Vanderhoek
c8bd4fdcd3 Weasal and Wabbits and BIG FOOT. 1999-05-02 21:38:01 +00:00
Bill Fenner
b0f9653aea Upgrade to 2.1.1 
PR:		ports/10228
Submitted by:	Michael Haro mharo@area51.fremont.ca.us
 1999-03-08 20:23:47 +00:00
Satoshi Asami
4b07f0329b Change *_DEPENDS on lang/perl5 to USE_PERL5 so we won't have any 
dependencies to perl5 in -current.  This might cause some unwanted
perl5 installations on -stable (if it was originally RUN_DEPENDS,
perl5 will now be installed during build too, etc.), but its lifetime
is limited anyway.
 1999-01-02 00:12:21 +00:00
Bill Fumerola
4f183f626d Update MASTER_SITES. 
Thanks To:	Fenner's portsurvey and ftpsearch.lycos.com
 1998-12-09 22:35:05 +00:00
Steve Price
e7efc40d5f Remove empty doc dir on deinstall. 1998-09-27 01:38:24 +00:00
David E. O'Brien
09b64b0d35 Remove manpages from pkg/PLIST 1998-08-13 21:16:00 +00:00
Steve Price
91f5c278fe Initial import of hmmer version 2.0. 
Profile hidden Markov models for biological sequence analysis.

PR:		7120
Submitted by:	Matthew Jason Euclid Barnhart <barnhart@sequencer.wustl.edu>
 1998-07-12 23:30:04 +00:00