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19 commits

Author SHA1 Message Date
Baptiste Daroussin
16cbf75f61 Use BROKEN helpers 2015-06-27 14:30:19 +00:00
Bartek Rutkowski
b23eb33111 biology/mafft: update 7.149 -> 7.221 
PR:		200603
Submitted by:	Reed A. Cartwright <cartwright@asu.edu> (maintainer)
 2015-06-03 17:04:19 +00:00
John Marino
64ee7e63bf 6 ports categories: Remove $PTHREAD_LIBS 
Categories: cad, devel, java, x11-fm, biology, deskutils

approved by:	PTHREAD blanket
 2015-03-24 16:01:21 +00:00
Baptiste Daroussin
99a3e8559c Cleanup plist 2014-10-20 07:10:48 +00:00
Adam Weinberger
a84c115a09 Convert a bunch of EXTRACT_SUFX=... into USES=tar:... 
Approved by:	portmgr (not really, but touches unstaged ports)
 2014-07-29 19:11:51 +00:00
Jonathan Chu
e4d4ffc175 Add DOCS and EXAMPLE options to biology/mafft 
PR:		ports/190161
Submitted by:	"Reed A. Cartwright" <cartwright@asu.edu> (maintainer)
Approved by:	swills (maintainer)
 2014-05-31 04:18:18 +00:00
Dmitry Marakasov
d68f2a384a - Update to 7.149 
- Clarify LICENSE
- Stagify

PR:		189746
Submitted by:	"Reed A. Cartwright" <cartwright@asu.edu> (maintainer)
 2014-05-20 19:35:30 +00:00
Martin Wilke
059bf913b9 - Convert USE_GMAKE to USES 2014-03-13 07:41:34 +00:00
Adam Weinberger
955d37365b Convert biology to MDOCS and MEXAMPLES 2014-01-03 15:46:52 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Mark Linimon
3fd15ea0ae Mark as broken on sparc64: depends on thread-local storage, which is not 
available on sparc64.

Hat:		portmgr
 2012-09-08 08:30:39 +00:00
Michael Scheidell
1217f4c6f2 - Submitter is now maintainer 
PR:		ports/169920
Approved by:	Fernan Aguero <fernan@iib.unsam.edu.ar> (maintainer)
 2012-08-07 13:54:02 +00:00
Michael Scheidell
2c946497ba - Update to version 6.903 
PR:		ports/169920
Submitted by:	"Reed A. Cartwright" <cartwright@asu.edu>
Approved by:	maintainer (timeout, 21 days)
 2012-08-07 12:26:39 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Pav Lucistnik
c44cd0a5c2 - Change depobj for fasta3 to something that does not change on fasta updates 
Reported by:	pointyhat
Feature safe:	yes
 2011-01-27 17:26:45 +00:00
Philip M. Gollucci
1d07cd60fd - Update download locations, update WWW 
Reported by:    -fetch-original pointyhat run
 2009-02-04 03:31:00 +00:00
Pav Lucistnik
3b18cc0258 - Chase fasta3 update 
Reported by:	pointyhat
 2008-04-01 22:24:51 +00:00
Renato Botelho
c1c9dc017a - Update to 5.743 
- Add a MASTER_SITE backup since oficial one just have last version and make
  it fetchable again

Submitted by:	maintainer by email
Reported by:	krismail
 2006-03-19 12:59:16 +00:00
Renato Botelho
81ba48cd37 Add mafft 5.734, multiple sequence alignments based on fast Fourier 
transform.

PR:		ports/93059
Submitted by:	Fernan Aguero <fernan@iib.unsam.edu.ar>
 2006-03-15 10:41:16 +00:00