..
ariadne
SHA256ify
2006-01-22 08:34:46 +00:00
artemis
- Fix fetch problems
2005-12-05 16:57:26 +00:00
avida
- Add SHA256
2005-11-24 00:04:00 +00:00
babel
- Add SHA256
2005-11-24 00:04:00 +00:00
belvu
Add belvu 2.29, a viewer for multiple sequence alignments.
2006-03-15 10:24:57 +00:00
biojava
BROKEN: Does not compile
2006-04-22 22:10:17 +00:00
blast
- Update to 2.0.20060101
2006-01-14 19:36:19 +00:00
blat
Add blat 33, a fast tool for local sequence similarity searches.
2006-03-15 10:26:12 +00:00
chemeq
- Resurrect, update to version 1.5 (literally 1.50 since I wanted to avoid
2006-01-19 19:47:59 +00:00
clustalw
SHA256ify
2006-01-22 08:34:46 +00:00
coalesce
- Add SHA256
2005-11-24 00:04:00 +00:00
crimap
SHA256ify
2006-01-22 08:34:46 +00:00
distribfold
Use SUB_FILES for pkg-message
2006-04-01 12:34:24 +00:00
dna-qc
SHA256ify (manually done and checked)
2006-01-22 09:54:26 +00:00
dotter
Add dotter 20021204 # last modified date in FTP server, a viewer for
2006-03-15 10:35:24 +00:00
embassy
For EMBOSS:
2006-03-31 09:43:21 +00:00
emboss
For EMBOSS:
2006-03-31 09:43:21 +00:00
fasta
Use SUB_FILES for pkg-message
2006-04-01 12:34:24 +00:00
fasta3
- Update to 34.t25.d5
2006-03-20 22:23:24 +00:00
fastdnaml
- Add SHA256
2005-11-24 00:04:00 +00:00
finchtv
SHA256ify
2006-01-22 08:34:46 +00:00
fluctuate
- Add SHA256
2005-11-24 00:04:00 +00:00
garlic
Update to 1.5
2006-03-15 08:10:49 +00:00
genpak
- Add SHA256
2005-11-24 00:04:00 +00:00
gff2ps
SHA256ify
2006-01-22 08:34:46 +00:00
gperiodic
- Add SHA256
2005-11-24 00:04:00 +00:00
grappa
SHA256ify
2006-01-22 08:34:46 +00:00
hmmer
SHA256ify
2006-01-22 08:34:46 +00:00
jalview
Jalview is a multiple alignment editor written in Java. It is used widely in a
2006-02-13 09:42:13 +00:00
kinemage
Reset jeremy@external.org who has not responded to email asking about
2006-04-05 05:46:33 +00:00
L-Breeder
- Update graphics/libglut to 6.4.1.
2006-01-12 12:54:32 +00:00
lagan
Add lagan 1.2, efficient tools for large-scale multiple alignments of
2006-03-16 22:31:26 +00:00
lamarc
With portmgr hat on, reset inactive maintainer. These ports are now up
2004-11-20 08:09:49 +00:00
libgenome
Conversion to a single libtool environment.
2006-02-23 10:40:44 +00:00
lsysexp
SHA256ify
2006-01-22 08:34:46 +00:00
mafft
- Update to 5.743
2006-03-19 12:59:16 +00:00
migrate
- Add SHA256
2005-11-24 00:04:00 +00:00
molden
- Update graphics/libglut to 6.4.1.
2006-01-12 12:54:32 +00:00
mopac
Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about
2006-04-05 06:13:46 +00:00
nab
SHA256ify
2006-01-22 08:34:46 +00:00
ncbi-toolkit
Replace ugly "@unexec rmdir %D... 2>/dev/null || true" with @dirrmtry
2006-01-22 01:29:46 +00:00
ortep3
Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about
2006-04-05 06:13:46 +00:00
p5-AcePerl
SHA256ify
2006-01-22 08:34:46 +00:00
p5-Bio-ASN1-EntrezGene
SHA256ify
2006-01-22 08:34:46 +00:00
p5-Bio-Das
SHA256ify
2006-01-22 08:34:46 +00:00
p5-bioperl
SHA256ify
2006-01-22 08:34:46 +00:00
p5-bioperl-devel
Replace ugly "@unexec rmdir %D... 2>/dev/null || true" with @dirrmtry
2006-01-22 01:29:46 +00:00
p5-bioperl-run
Bioperl-run contain modules that provides a PERL interface to various
2006-05-02 21:30:08 +00:00
paml
Update to 3.14b
2005-11-10 01:21:42 +00:00
phylip
Put PORTEPOCH back.
2006-02-09 01:17:59 +00:00
platon
Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about
2006-04-05 06:13:46 +00:00
povchem
- Drop old povchem.c checksum
2005-11-24 00:02:29 +00:00
primer3
SHA256ify
2006-01-22 08:34:46 +00:00
psi88
Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about
2006-04-05 06:13:46 +00:00
py-biopython
Update to 1.41
2005-11-11 01:15:35 +00:00
pymol
SHA256ify
2006-01-22 08:34:46 +00:00
rasmol
- Add SHA256
2005-11-24 00:04:00 +00:00
recombine
- Add SHA256
2005-11-24 00:04:00 +00:00
ruby-bio
- Update to 1.0.0
2006-04-25 22:09:29 +00:00
seaview
- Update to 2006.02.13
2006-04-05 01:58:03 +00:00
seqio
SHA256ify
2006-01-22 08:34:46 +00:00
sim4
- Add SHA256
2005-11-24 00:04:00 +00:00
t_coffee
Update to 3.27.
2006-02-10 09:45:28 +00:00
tinker
- Add SHA256
2005-11-24 00:04:00 +00:00
treepuzzle
SHA256ify
2006-01-22 08:34:46 +00:00
treeviewx
Update to 0.5.1
2005-12-06 02:00:55 +00:00
tRNAscan-SE
SHA256ify
2006-01-22 08:34:46 +00:00
wise
SHA256ify
2006-01-22 08:34:46 +00:00
xdrawchem
BROKEN: Configure fails
2006-02-20 01:46:03 +00:00
xmolwt
Reset rmiya@cc.hirosaki-u.ac.jp who has not responded to email asking about
2006-04-05 06:13:46 +00:00
Makefile
Bioperl-run contain modules that provides a PERL interface to various
2006-05-02 21:30:08 +00:00