freebsd-ports/biology/diamond
Joseph Mingrone ac30d1f025 biology/diamond: Update to version 0.8.31.
Upstream changelog:

  - Added compositional score adjustments (option --comp-based-stats
    (0,1)). This is a useful feature for filtering false positive hits and
    is enabled by default.

  - Removed --single-domain option and replaced by --max-hsps, to set the
    maximum number of Hsps per query/subject pair, to be consistent with
    BLAST. This option is set to 1 by default as getting more than 1 Hsp
    per subject seems to be confusing users.

  - Added option --no-self-hits to filter identical self-hits.

Approved by:	AMDmi3 (mentor)
Differential Revision:	https://reviews.freebsd.org/D9134
2017-01-12 23:23:19 +00:00
..
files Update to 0.8.5 2016-06-09 01:39:58 +00:00
distinfo biology/diamond: Update to version 0.8.31. 2017-01-12 23:23:19 +00:00
Makefile biology/diamond: Update to version 0.8.31. 2017-01-12 23:23:19 +00:00
pkg-descr