48 lines
1.2 KiB
Makefile
48 lines
1.2 KiB
Makefile
# Created by: Mauricio Herrera Cuadra <mauricio@arareko.net>
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# $FreeBSD$
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PORTNAME= bioperl-run
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PORTVERSION= 1.6.901
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PORTREVISION= 1
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CATEGORIES= biology perl5
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PKGNAMEPREFIX= p5-
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MAINTAINER= perl@FreeBSD.org
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COMMENT= Wrapper modules for common bioinformatics tools
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LICENSE= ART10 GPLv3
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LICENSE_COMB= dual
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BUILD_DEPENDS= p5-bioperl>=1.6.0:${PORTSDIR}/biology/p5-bioperl \
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p5-IPC-Run>=0:${PORTSDIR}/devel/p5-IPC-Run \
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p5-Algorithm-Diff>=0:${PORTSDIR}/devel/p5-Algorithm-Diff \
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p5-XML-Twig>=0:${PORTSDIR}/textproc/p5-XML-Twig \
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p5-File-Sort>=0:${PORTSDIR}/misc/p5-File-Sort \
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p5-Config-Any>=0:${PORTSDIR}/devel/p5-Config-Any
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RUN_DEPENDS:= ${BUILD_DEPENDS}
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CONFLICTS= p5-bioperl-run-1.[13579]*
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USE_GITHUB= yes
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GH_ACCOUNT= bioperl
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GH_TAGNAME= 96ccd93
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USES= perl5 shebangfix
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USE_PERL5= modbuild
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SHEBANG_FILES= scripts/*
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OPTIONS_DEFINE= DOCS
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post-build:
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(cd ${WRKSRC} && ${PERL} ./Build manifest)
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post-install:
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.for i in bioperl_application_installer multi_hmmsearch panalysis papplmaker run_neighbor run_protdist
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${CP} ${WRKSRC}/scripts/${i}.PLS ${STAGEDIR}${PREFIX}/bin/bp_${i}
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.endfor
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@${MKDIR} ${STAGEDIR}${DOCSDIR}
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.for doc in AUTHORS Changes INSTALL.PROGRAMS README
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${INSTALL_DATA} ${WRKSRC}/${doc} ${STAGEDIR}${DOCSDIR}
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.endfor
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.include <bsd.port.mk>
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