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SIMA (Sequential IMage Analysis) is an Open Source package for analysis of time-series imaging data arising from fluorescence microscopy. The functionality of this package includes: correction of motion artifacts segmentation of imaging fields into regions of interest (ROIs) extraction of dynamic signals from ROIs The included ROI Buddy software provides a graphical user interface (GUI) supporting the following functionality: manual creation of ROIs editing of ROIs resulting from automated segmentation registration of ROIs across separate imaging sessions
15 lines
478 B
Makefile
15 lines
478 B
Makefile
# $NetBSD: Makefile,v 1.1 2015/01/11 23:37:24 jihbed Exp $
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DISTNAME= sima-0.3.2
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PKGNAME= ${PYPKGPREFIX}-${DISTNAME}
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CATEGORIES= biology
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MASTER_SITES= https://pypi.python.org/packages/source/s/sima/
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MAINTAINER= jihbed.research@gmail.com
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HOMEPAGE= http://www.losonczylab.org/sima/
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COMMENT= Software for analysis of sequential imaging data
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LICENSE= gnu-gpl-v2
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.include "../../lang/python/distutils.mk"
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.include "../../math/py-numpy/buildlink3.mk"
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.include "../../mk/bsd.pkg.mk"
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