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7 commits

Author SHA1 Message Date
bacon
385a79042f ncbi-blast+: Upgrade to 2.8.1 
Support for new BLAST database format
Increased makeblastdb output file size limit to 4GB
Other minor bug fixes and enhancements

OK wiz@
 2019-01-07 15:00:10 +00:00
adam
16dd5de231 revbump after updating textproc/icu 2018-12-09 18:51:58 +00:00
ryoon
b9c1e1d533 Recursive revbump from textproc/icu-62.1 2018-07-20 03:33:47 +00:00
jperkin
5393242c73 *: Move SUBST_STAGE from post-patch to pre-configure 
Performing substitutions during post-patch breaks tools such as mkpatches,
making it very difficult to regenerate correct patches after making changes,
and often leading to substituted string replacements being committed.
 2018-07-04 13:40:07 +00:00
bacon
4cdd11c350 biology/ncbi-blast+: Respect env to support PKGSRC_USE_RELRO 
Fix a previous patch that hard-coded relro support by patching in pkgsrc
CFLAGS, CXXFLAGS, and LDFLAGS instead.

OK wiz@
 2018-05-22 21:37:29 +00:00
adam
8f438fb8df ncbi-blast+: removed references to wip 2018-04-29 21:00:04 +00:00
bacon
6e68fec7bb biology/ncbi-blast+: import ncbi-blast+-2.7.1 
The Basic Local Alignment Search Tool (BLAST) finds regions of local similarity
between sequences. The program compares nucleotide or protein sequences to
sequence databases and calculates the statistical significance of matches.
BLAST can be used to infer functional and evolutionary relationships between
sequences as well as help identify members of gene families.

OK wiz@
 2018-04-27 20:28:28 +00:00