From Wen Heping in PR pkg/43204.
This minor release removes datetime support, which fixes the binary
incompatibility issues with SciPy and other packages. It also includes several
bug fixes. No new features are introduced.
Bugs fixed
----------
- #1336: Fix for 1299 exposes Bus error on Sparc
- #1379: CPU ID not set correctly on PARISC
- #1388: frombuffer calls PyErr_Format without throwing an error
- log1p
- kaiser for M=1
- paver execution on Windows 7 for Python 2.6
- several fixes to Chebyshev and Polynomial
changes:
-General build updates and bug fixes
-Bug fix for segfaults with some uses of integrate()
-New Simplified Chinese translation
-Fix crash with unsupported operator in RPN syntax
-Fix reduction of vector size
Mon Mar 22 23:54:07 MDT 2010
* GSL-1.14 support
* Added GSL::Multiset class
* Added GSL::Function#glfixed(a, b table)
Sun Aug 16 19:01:31 BOT 2009
* Added Non-negative Matrix Factorization (NMF) support (by Roman Shterenzon)
Sat Aug 8 22:36:24 BOT 2009
* Added GSL-1.13 features:
* Added GSL::Monte::Miser#params_get, GSL::Monte::Vegas#params_get
* Added GSL::BSpline::greville_abscissa(i)
* Added GSL::Poly#eval_derivs(x)
* Added a new minimization algorithm "quad_golden"
* Added a new multimin algorithm "nmsimplex2rand"
Tue Jun 9 10:42:30 JST 2009
* Fixed bug in linalg.c (bug [#25842])
Thu Feb 2 12:16:38 JST 2009
* Fixed a bug in GSL::Histogram.alloc_uniform() (bug [#23040])
* Fixed a bug in GSL::Vector#/ (bug [#23334])
Thu Nov 6 17:34:18 JST 2008
* Match with the tensor extension version 0.99
* now not compatible for the versions older than tensor-0.97.
Sat Jul 26 08:23:45 JST 2008
* GSL::Poly.eval now handles complex numbers (GSL-1.11)
* Added new quasi-random generators "halton" and "reversehalton"
* Added a module function GSL::MultiFit::linear_residuals() (GSL-1.11)
* Fixed a bug in ODE solver
Mon Jun 30 22:07:24 JST 2008
* Fixed GSL::Vector#normalize (#20865)
Mon May 26 19:21:15 JST 2008
* Fixed a bug in GSL::Matrix::to_v (#19757)
* Fixed a bug in GSL::Vector::Int multiplication (#19924)
pkgsrc changes:
- Adjust dependencies
Upstream changes:
0.39 Tue 16 Mar 2010
- Doc fix (RT#54507, Patrick Cronin)
- Upped Copyright notices to 2010
- Drop YAML version to 1.0
C++ library of mathematical, signal processing and communication
routines
Its main use is in simulation of communication systems and for
performing research in the area of communications. The kernel of the
library consists of generic vector and matrix classes, and a set of
accompanying routines. Such a kernel makes IT++ similar to MATLAB or
GNU Octave.
* What is new in gsl-1.14:
** Upgraded to latest libtool, autoconf and automake (libtool-2.2.6b,
autoconf-2.65, automake-1.11.1). Fixes security hole in 'make
dist' (see Automake CVE-2009-4029).
** Added support for "multisets", which are similar to permutations
and combinations. A multiset is an array of k integers in the
range 0 to n-1 where each value may occur more than once. Multisets
can be used to iterate over the indices of a k-th order symmetric
tensor in n-space. (Rhys Ulerich)
** Added gsl_integrate_glfixed routines for performing fixed order
Gauss-Legendre integration
(Pavel Holoborodko, Konstantin Holoborodko, Rhys Ulerich)
** In the LMDER multi-dimensional fitting routines, the return code
GSL_ENOPROG is now used instead of GSL_CONTINUE for the case where
10 or more attempts to find a suitable trial step have been made
without success. [bug #25383]
** The confluent hypergeometric function gsl_sf_hyperg_U (a,b,x) has
been extended to support x < 0 for cases not involving
singularities in 1F1(a,b,x). [bug #27859]
** The F-distribution gsl_ran_fdist_pdf now avoids unnecessary
underflow and overflow and handles cases where n > 248. [bug
#28500]
** The SVD routines now use a scaled version of the implicit QR method
and compute the shift more reliably for values at the limit of
double precision, avoiding potential NaNs. [bug #28767]
** A compile time error is emitted if the configuration stage prevents
the functions gsl_isnan and gsl_finite from being defined.
** Added missing dereference in GSL_VECTOR_COMPLEX when not using
GSL_RANGE_CHECK [bug #28017]
** Improved the range of gsl_sf_hyperg1F1(a,b,x) when a<0,b>0. [bug
#28718]
** Added macros GSL_MAJOR_VERSION and GSL_MINOR_VERSION in
<gsl/gsl_version.h>
** Improved gsl_eigen_symmv and gsl_eigen_symm to avoid a potential
infinite loop when the tridiagonalised matrix contains very small
values. [bug #28096]
** Added functions gsl_multifit_linear_usvd and
gsl_multifit_wlinear_usvd for multilinear fitting without
column-scaling of the fit matrix.
is rendered and installed. Disabling the option is helpful e.g. for
web servers supporting OpenID logins, where X and TeX aren't present.
Bump PKGREVISION.
pkgsrc changes:
- Add license definition
- Adjust dependencies
Upstream changes:
0.05 Mon. Feb 22, 2010
- updates copyright on all files
* Test::Excel::Template::Plus
- Fixing some test failures because of an
internals change in Spreadsheet::ParseExcel
- thanks to Chris Travers
pkgsrc changes:
- Adjust patch which allows to use math/pari
Upstream changes:
2.01080604
Add (missing in 2.1.*) declaration for pari_init().
Minor miscount in docs.
Math::PariBuild: detecting `patch --binary' missed -p1; same for inc_h.diff
Work around bug in XSUB.h (at least up to 5.11.2) with puts.
Get GPDATADIR from gp, if present.
Make self-documentation for switching to 2.3.* more explicit.
kmx patch for mingw 32-bit Win-build:
include windows.h (early!) in Pari.xs and highlvl.c
enable assembler for this build
x86_64 assembler detection after 2.2.7; thanks to Alexander Haeckel
Based on PR#42834 by Wen Heping.
Update MASTER_SITES, set LICENSE=modified-bsd, 3-caulse BSD.
======================================================================
Networkx-1.0.1
Release date: 11 Jan 2010
See: https://networkx.lanl.gov/trac/timeline
Bug fix release for missing setup.py in manifest.
======================================================================
Networkx-1.0
Release date: 8 Jan 2010
See: https://networkx.lanl.gov/trac/timeline
New features
This release has sigificant changes to parts of the graph API to allow graph, node, and edge attributes. See http://networkx.lanl.gov//reference/api_changes.html
* Update Graph, DiGraph, and MultiGraph classes to allow attributes.
* Default edge data is now an empty dictionary (was the integer 1)
* Difference and intersection operators
* Average shortest path
* A* (A-Star) algorithm
* PageRank, HITS, and eigenvector centrality
* Read Pajek files
* Line graphs
* Minimum spanning tree (Kruskal¡Çs algorithm)
* Dense and sparse Fruchterman-Reingold layout
* Random clustered graph generator
* Directed scale-free graph generator
* Faster random regular graph generator
* Improved edge color and label drawing with Matplotlib
* and much more, see https://networkx.lanl.gov/trac/query?status=closed&group=milestone&milestone=networkx-1.0
Examples
* Update to work with networkx-1.0 API
* Graph subclass example
======================================================================
Networkx-0.99
Release date: 18 November 2008
See: https://networkx.lanl.gov/trac/timeline
New features¢ù
This release has sigificant changes to parts of the graph API. See http://networkx.lanl.gov//reference/api_changes.html
* Update Graph and DiGraph classes to use weighted graphs as default Change in API for performance and code simplicity.
* New MultiGraph and MultiDiGraph classes (replace XGraph and XDiGraph)
* Update to use Sphinx documentation system http://networkx.lanl.gov/
* Developer site at https://networkx.lanl.gov/trac/
* Experimental LabeledGraph and LabeledDiGraph
* Moved package and file layout to subdirectories.
Bug fixes
* handle root= option to draw_graphviz correctly
Examples
* Update to work with networkx-0.99 API
* Drawing examples now use matplotlib.pyplot interface
* Improved drawings in many examples
* New examples - see http://networkx.lanl.gov/examples/
Upstream changes:
2.37 February 2 2010 - Minor
+ Added set_chartarea() and set_plotarea() methods to set
chart and plot background colours and border lines.
! Fixed bug where embedded charts gave "Data may be lost"
warning. Reported by Andreas Strobitzer.
! Fixed issue where set_properties() didn't work with ::Big.
Marked ::Big as deprecated in the docs in favour of using
Spreadsheet::WriteExcel directly. Removed WorkbookBig.pm.
PRNG is a collection of portable, high-performance ANSI-C
implementations of pseudorandom number generators such as linear
congruential, inversive congruential, and explicit inversive
congruential random number generators (LCG, ICG and EICG, respectively)
created by Otmar Lendl and Josef Leydold.
* The PCRE library has been updated to version 8.00.
* R CMD INSTALL has new options --no-R, --no-libs, --no-data,
--no-help, --no-demo, --no-exec, and --no-inst to suppress
installation of the specified part of the package.
* The documented line-length limit of 4095 bytes when reading
from the console now also applies also to parse(file="")
(which previously had a limit of around 1024 bytes).
* A Bioconductor mirror can be set for use by setRepositories()
via the option "BioC_mirror".
* Double-clicking in a tk_select.list() list box now selects the item
and closes the list box (as happens on the Windows select.list() widget).
* configure will be able to find a usable libtiff in some rare
circumstances where it did not previously (where libtiff
needed to be linked explicitly against -ljpeg).
* Making refman.pdf works around a problem with the indexing
with hyperref 6.79d and later.
* The 'extended' argument is deprecated in strsplit(), grep(),
grepl(), sub(), gsub(), regexpr() and gregexpr() (not just the
value extended = FALSE) and will be removed in R 2.11.0.
* bug fixes
per update request from Wen Heping by PR#42755.
Pkgsrc changes:
* Set LICENSE
* correct EOL style of installed files
* Add self-test target
Changes:
--0.14--
Released February 5, 2010
General changes:
* Fully separated the code into "low-level" and "high-level", permitting the
use of alternative contexts (the mpmath.mp object provides the default
implementation)
* Implemented a context for fast double-precision arithmetic using Python
types (mpmath.fp)
* Implemented hooks for importing a faster version of mp arithmetic from Sage
* Implemented optimized fp versions of certain functions (including erf, erfc,
gamma, digamma, ei, e1)
* Renamed and reorganized various internal modules and methods (including
merging low-level modules into mpmath.libmp). This should not affect most
external code using top-level imports.
Plotting:
* Implemented splot() for 3D surface plots (contributed by Jorn Baayen)
* Permit calling plot functions with custom axes (contributed by Jorn Baayen)
Matrices:
* Fixed lu_solve for overdetermined systems (contributed by Vinzent Steinberg)
* Added conjugate matrix transpose (contributed by Vinzent Steinberg)
* Implemented matrix functions (expm, cosm, sinm, sqrtm, logm, powm)
Miscellaneous:
* Prettier printing of numbers with leading zeros at small precisions
* Made nstr pass on kwargs, permitting more formatting options
* Fixed wrong directed rounding of addition of numbers with large magnitude
differences
* Fixed several docstring typos (contributed by Chris Smith)
* Fixed a bug that prevented caching of quadrature nodes to work optimally.
Special functions:
* Implemented fast evaluation for large imaginary heights of the Riemann zeta
function, Z function and derived functions using the Riemann-Siegel
(contributed by Juan Arias de Reyna)
* Unified the zeta() and hurwitz() functions, automatically selecting a fast
algorithm
* Improved altzeta() to fall back to zeta() for large arguments
* Fixed accuracy of zeta(s) for s ~= 1
* Implemented exact evaluation of Euler numbers (contributed by Juan Arias
de Reyna)
* Implemented numerical evaluation of Euler numbers and Euler polynomials
(eulernum(), eulerpoly())
* Fixed bernpoly() and eulerpoly() to compute accurate values for large
parameters
* Fixed accuracy problems for hypergeometric functions with large parameters
* Faster evaluation of hypergeometric series using on-the-fly code generation
* Optimized hypercomb to detect certain zero terms symbolically
* Removed the djtheta function (jtheta() accepts a derivative parameter)
* Implemented li(x, offset=True) to compute the offset logarithmic integral
* Fixed wrong branch in Lambert W function for certain complex inputs
* Implemented the reflection formula for the Barnes G-function,
superfactorials, hyperfactorials, permitting large arguments in the left
half-plane
* Implemented analytic continuation to |z| >= 1 for hypergeometric functions
pFq with p=q+1; added hyp3f2()
* Implemented Borel summation of divergent pFq functions with p > q+1
* Implemented automatic degree reduction of hypergeometric functions with
repeated parameters
* Added convenience functions expj(), expjpi()
* Use Mathematica's convention for the continuation of the Meijer G-function
* Added phase(), polar(), rect() functions for compatibility with the
Python 2.6 cmath module
* Implemented spherical harmonics (spherharm())
* Optimized ci(), si(), chi(), shi() for complex arguments by evaluating
them in terms of ei()
* Optimized hyp2f1 for z ~= -1
0.16.1
* Clean up package definition and tests;
* Better cast/sanitation of non-integer values;
* Fixed bug #16019 (incorrect trimming of vowels in the Italian extension).
0.16.0
* Added numerous language unit tests (Bulgarian, English 100, English GB,
English US, French, French Belgium, German, Italian, Portuguese Brazilian);
* Swap all tests to PHPUnit 3;
* Bugs fixed:
- #10744 wrong getLocales() Docblock;
- #14988 bogus non-int parsing;
- #14667 bad trascription for 101 numbers and 102 thousands bug;
- incorrect values for 80 and 81 in French Belgium;
- #15260 uninitialized string offset in Brazilian Portuguese.
0.15.0
* New file for Dutch language (Thanks to WHAM van Dinter);
* package.xml updated to version 2.0;
* Bugs fixed:
- #5618 locale name (and file name) for Estonian is changed from ee to et;
- #6654 bug in Russian translation;
* New feature added:
- #7339 new Numbers_Words::getLocales() method is available (Thanks to
Bertrand Gugger).
1.0.2
QA release:
- Fix bug with _L and _C giving wrong values (swapped)
- Fix bug: toRoman() used $this although it's static
- Add unit tests
1.0.1
- Added support for lowercase input/output
- Starting with this release conversion is supported from integers up to
5 999 999 and from the equivalent Roman Numerals
- Added an optional HTML tag to disply roman numerals over 4000 in an
historically accurate fashion
- General fixes and code rewrite maintaining backward compatibility
