Changes from pkg 1.10.99.6 to 1.10.99.7
- Sort fts traversal in repo creation
- Fix floating pint exception when packaging packages with weird elf files
- More test cases for config merge
- Fix running the testsuite on linux and osx
- Fix pkg version regarding flavors
- Add support for creating packages with a hash in their names
- Accept DT_SONAME anywhere in .dynamic
- make pkg version -r imply -R
- Some fixes for the progression display
- Rename some variables in security periodic scripts.
- Parse FreeBSD OS version and forbid to install too new packages
Changes from pkg 1.10.99.5 to 1.10.99.6
- Lots of fixes/improvements on periodic scripts
- Fix typo in the .pc file
- Only check for origin if the strings contains / in pkg version
- Support flags when exporting the metalog
- Ignore flags when installing as a user
- fix again using pattern as package arch
- recognize armv7
- add %q to pkg_printf(3) and pkg-query(8) to print altabi
- add an extra line when printing pkg-messages to improve readability
- stop considering nfs as dangerous and if a corruption happens on nfs drive
by a message the user to the highly possible reason of the corruption so
he can fix
- zsh completion imrpovements
Changes from pkg 1.10.99.4 to 1.10.99.5
- pkg clean is now happy if the cache dir non existing
- 410.pkg-audit now uses anticongestion on freebsd 12
- fix pkg install -r foo if foo is a disabled repository
- fix elf handling on non FreeBSD
- fix support for platforms without AT_SYMLINK_NOFOLLOW
- fix dropping privileges on Linux
- fix build with recent libbsd
- fix duplicate pkg registration overwriting the existing pkg
- better ABI name on linux
- lots of changes in internal API to use fd when possible
- removed option: pkg repo -L
Changes from pkg 1.10
- Use dep_formula in the solver
- Cache pw result to avoid over reloading nssswitch.conf
- Remove pkg2ng and support for pkg_ databases
Changes in version 2.7-0
o New dialogs for repeated-measures ANOVA and ANCOVA and plots with one or
two repeated-measures factors.
o New dialogs to reshape data sets from wide to long and from long to wide.
o Better handling of discrete numeric variables (after suggestions by Ethan Harris).
o Fix clipboard data set input to work on macOS.
o Improved pie charts and bar graphs via the piechart() and Barplot()
functions in RcmdrMisc.
o New File > Exit > Restart Commander menu item (suggestion of Vilmantas Gegzna).
o Fix Tk error produced by closing the dataset viewer and then repopening
the same data set (reported by Jose G. Conde).
o Fixes to handling panes with console.output and log.commands options set
to various values (thanks to Vilmantas Gegzna).
o Better handling of character data following change to stringsAsFactor
option in R 4.0.0+.
o Check for presence of Tktable and adapt to its absence by suppressing the
Rcmdr dataset editor and delta method menu item; Tktable eventually to be
replaced with tablelist.
o Small improvements and bug fixes.
o Updated translations (with thanks to): Basque (Joserra Rueda), French
(Milan Bouchet-Valat), Hungarian (thanks to Tamas Ferenci), Indonesian (I
Made Tirta), Japanese (Takaharu Araki), Korean (Jong-Hwa Shin), Russian
(Alexey Shipunov), Slovenian (Matjaz Jeran), Spanish (Manuel Munoz
Marquez).
Changes in version 2.6-3
o Fix bug in processing resubmitted multi-line commands (reported by
Katarina Kosmelj).
o Fix bug in processing multiline comments in onSubmit() in Commander.
o Updated Slovenian translation (thanks to Matjaz Jeran).
Changes in version 2.6-2
o New Hungarian translation (thanks to Tamas Ferenci and Andrea Harnos).
o Fixed bug in Ctrl-S for script window (reported by Mayeul Kauffmann).
Changes in version 2.6-1
o Restore older version of splitCmd().
o For GLMs and GLMMs, provide confidence intervals for exponentiated
coefficients for models using log or logit link (suggestion of Tan Chuen
Seng).
o Make listTwoLevelFactors() work properly for logical and character
variables (treated as factors) with NAs (problem pointed out by Vilmantas
Gegzna).
o Insure that data set columns are usable in the Rcmdr, e.g., excluding
list columns (problem pointed out by Vilmantas Gegzna).
o Change instances of class(x) == "y" to inherits(x, "y").
o Use apalike rather than apa BiBTeX package in Getting Started vignette
(latter has been removed from TeXLive, reported by Brian Ripley).
Changes in version 2.6-0
o Linear and generalized linear mixed models dialogs added.
o Made editDataset() with data.frame method (suggestion of Ulrike Gromping).
o New R Commander hex sticker.
o Small fixes and improvements.
o Updated translations (with thanks to): Chinese (Tsung-wu Ho), Indonesian
(I Made Tirta), Japanese (Takaharu Araki), Polish (Lukasz Daniel), Romanian
(Adrian Dusa), Russian (Alexey Shipunov), Slovenian (Matjaz Jeran), Spanish
(Manuel Munoz Marquez).
Changes to Version 3.0-9
o Declare linearHypothesis.survreg() method, previously omitted from
NAMESPACE (following question by Robert Dinterman); tweaks to survreg
methods for linearHypothesis(), Anova(), and deltaMethod() to make them
more robust.
o Fix bug in hccm() when model matrix includes just one column (reported by
Justin Yap).
o Fix buglet in scatterplotMatrix.formula() when groups specified.
o Several functions are now generic: avPlots(), ceresPlots(), crPlots(),
mcPlots().
o Enable spread smoothers for crPlot(), ceresPlot(), and residualPlot()
(suggestion of Dave Armstrong).
o Small changes to docs.
Changes to Version 3.0-8
o Import() now defaults to stringsAsFactors=FALSE to match the default
behavior of read.table() as of R 4.0.0.
o New strings2factors() function to convert character variables in a data
frame to factors.
o Added data.frame method for S().
o Fixed a bug in estimateTransform.lm() that returned the correct answer
with an unneeded warning.
o Fixed Anova.coxph() to handle weights properly (problem reported by
Daniel Morillo Cuadrado).
Changes to Version 3.0-7
o Fixed boxCox(), powerTransform() to work when 'car' package is not attached
o Fixed Anova() to work with "lme" models without an intercept (to fix bug
reported by Benjamin Tyner).
Changes to Version 3.0-6
o Explicitly import utils::globalVariables() (suggestion of Vince Carey).
Changes to Version 3.0-5
o Change class(x) == "y" to inherits(x, "y") throughout code (thanks to Martin Maechler).
Changes to Version 3.0-4
o Scoping improvements to deltaMethod(), which now also takes an optional
hypothesized value; contribution and suggestion by Pavel Krivitsky.
o Make Anova() work for coxph() models with strata (following problem
reported by Susan Galloway Hilsenbeck).
o Modify carPalette() to provide a colorblind-friendly palette as an option
(suggestion of Sercan Kahveci).
o Small improvements.
Changes to Version 2.7-1
o Added repeatedMeasuresPlot().
o Added reshapeL2W() and reshapeW2L().
o The stringsAsFactors argument to readSAS(), readSPSSS(),
readStata(), and readXL() now defaults to FALSE.
o Barplot(), discretePlot(), Dotplot(), Hist(), plotMeans()
accommodate logical and character variables as grouping factor(s).
Changes to Version 2.7-0
o Added discreteCounts() and piechart() (after suggestions of Ethan Harris).
o Added counts/percents to bars in Barplot() (suggestion of Ethan Harris).
o Fixed DeltaMethod() so that it doesn't ignore the level argument
(reported by on de Haan).
o Small improvements.
Version 2.4-2, 2020-09-12
* Support reading/writing special values (e.g. NA, Inf) without substitution,
mainly in cases where type conversion between R and NetCDF is not required.
* Fix selection of na.mode values 0,1,2
* Fix range checks for numeric conversions with packing
* Significantly increase test coverage of type conversion routines
* Support parallel NetCDF when running with MPI
* Allow creation of datasets in "data64" (CDF5) format
* Support diskless files and in-memory manipulation of persistent files
Version 2.3-1, 2020-04-27
* Fix problem when defining scalar variables with netcdf-4.7.4
Version 2.1-1, 2019-10-18
* Remove automatic handling of fill values in user-defined types
* Link rwinlib libraries by pathname to fix r-hub Windows builds
* Correct quoting of external software names in DESCRIPTION
Version 2.0-4, 2019-10-13
* Fix OSX packages by linking expat library
Version 2.0-3, 2019-10-05
* Support NetCDF-4 features for reading and writing of datasets.
* Suggest bit64 package for NC_INT64 and NC_UINT64 types.
* Drop support for netcdf-3.x library, require netcdf-4.x.
* Drop support for udunits-1 library.
* Disable calendar functions if udunits-2.x is not found during build.
# DBI 1.1.0
## New features
- New `DBIConnector` class (#280).
- Specify `immediate` argument to `dbSendQuery()`, `dbGetQuery()`,
`dbSendStatement()` and `dbExecute()` (#268).
- Use specification for `dbGetInfo()` (#271).
- `dbUnquoteIdentifier()` now supports `Id()` objects with `catalog`
members (#266, @raffscallion). It also handles unquoted identifiers
of the form `table`, `schema.table` or `catalog.schema.table`, for
compatibility with dbplyr.
## Documentation
- New DBI intro article (#286, @cutterkom).
- Add pkgdown reference index (#288).
- DBI specification on https://dbi.r-dbi.org/dev/articles/spec now
comes with a table of contents and code formatting.
- Update examples to refer to `params` instead of `param` (#235).
- Improved documentation for `sqlInterpolate()` (#100). Add usage of
`SQL()` to `sqlInterpolate()` examples (#259, @renkun-ken).
- Improve documentation for `Id`.
## Internal
- Add tests for `dbUnquoteIdentifier()` (#279, @baileych).
- `sqlInterpolate()` uses `dbQuoteLiteral()` instead of checking the
type of the input.
- Avoid partial argument match in `dbWriteTable()` (#246, @richfitz).
On NetBSD >8, for several CPU types we depend on compat80, because
bootstrap kits are build for NetBSD 8. On those, also add a
BUILD_DEPENDS on openssl, because the bootstrap kits need pkgsrc
openssl libs.
Adjust and reorganize comments (but the only functional change is the
NetBSD >8 openssl BUILD_DEPENDS).>
Resolves failure to build on NetBSD 9.
(The entire "NetBSD>8" section is a hack that can be removed with
improved bootstrap generation.)
0.4
- Fixed issue #12: inconsistent treatment of new lines (Thanks to @danhalligan)
- Updated documentation for disabling html escaping. (issue #16)(Thanks to @ctbrown)
0.3-3
- Added an option "strict" to render. Setting it to FALSE allows for "." in names
and use "$" for splitting which is a more natural R syntax.
# purrr 0.3.4
* Added documentation for exporting functions created with purrr
adverb (@njtierney, #668). See `?faq-adverbs-export`.
* Added `none()`, which tests that a predicate is false for all elements
(the opposite of `every()`) (@AliciaSchep, #735).
Fixes lots of warnings on deinstall of the following type:
pkg_delete: Directory `/usr/pkg/share/icons/hicolor/symbolic' disappeared, skipping
Bump PKGREVISION.
# cli 2.0.2
* The status bar now does not simplify multiple spaces by a single space.
* cli now does not crash if it fails to detect whether the RStudio theme
is a dark theme (#138).
* cli now works better with wide Unicode characters, for example emojis.
In particular, a status bar containing emojis is cleared properly (#133).
* The status bar now does not flicker when updated, in terminals (#135).
# cli 2.0.1
* Symbols (`symbol$*`) are now correctly printed in RStudio on Windows (#124).
* The default theme for `cli_code()` output looks better now, especially
in RStudio (#123).
* Remove spurious newline after a `cli_process_start()` was cleared
manually, and also at the end of the function.
* Use Oxford comma when listing 3 or more items (@jonocarroll, #128).
# cli 2.0.0
## Semantic command line interface tools
cli 2.0.0 has a new set of functions that help creating a CLI using a set
of higher level elements: headings, paragraphs, lists, alerts, code blocks,
etc. The formatting of all elements can be customized via themes.
See the "Building a semantic CLI" article on the package web site:
https://cli.r-lib.org
## Bug fixes:
* Fix a bug in `is_dynamic_tty()`, setting `R_CLI_DYNAMIC="FALSE"` now
properly turns dynamic tty off (#70).
CVS: ----------------------------------------------------------------------
# Version 2.0.0
* Expectations now optionally support the package `tinytest`.
`tinytest` is used as backend if it is attached, otherwise checkmate defaults
to `testthat`.
There is now also a vignette on how to setup `checkmate` for `tinytest`.
* Coercion now only affects double vectors.
* Improved error message for type detection in `*List`.
* Removed `*Bit`, the `bit` package is orphaned.
* Fixed documentation.
with Xcode 12:
configure: error: SDK not found. When using --with-macos-sdk, you must
specify a valid SDK. SDKs are installed when the optional cross-development
tools are selected during the Xcode/Developer Tools installation.
While here, merge some of the Darwin conditional logic.
I was thinking of this as "needs a readline and happens to need GNU
this minute" but mk/readline.buildlink3.mk is clear that it should not
be used this way. NFCI.
Passes bup's test suite on netbsd-8/amd64, with TZ=UTC (needed to work
around what is likely a bug in git around DST changes).
Packaging changes/notes:
- bup depends directly on readline, GNU version required
- man pages have not yet been updated
Upstream changes include many minor improvements and bugfixes,
and:
Notable changes in 0.31 (since 0.30.1)
======================================
* Python 3 is now supported, and Python 2 support is deprecated. It's
possible that we'll stop new development for Python 2 fairly soon.
If so, we'll probably continue to fix bugs in the last Python 2
compatible version for a while, but please make plans to migrate.
* `bup features` has been added. It reports information about bup
itself, including the Python version, and the current availability
of features like readline or support for POSIX ACLs.
Build and install
-----------------
* `bup` itself is now located in now located in the cmd/ directory in
the install tree and finds sub-commands, etc. relative to its own
location.
# devtools 2.3.1
* `Run* `run_examples()` arguments `run` and `test` are deprecated in
favor of the (hopefully) more clear `run_dontrun` and `run_donttest`
(pkgload/#107).
* Previously deprecated functions `dr_devtools()` and `dr_github()` have been removed.
* Documentation has been synced with remotes 2.2.0
# devtools 2.3.0
* `build()` now errors with a more informative error message when passed an
invalid `pkg`. (#2177)
* New `build_rmd()` can build any `.Rmd` file in a clean session.
* `dev_sitrep()` now works correctly when R is out of date (#2204)
# devtools 2.2.2
* `install_dev_deps()` now passes formal args onto `remotes::install_deps()`
(@t-gibson, #2166)
* `spell_check()` now checks if `spelling` is installed and prompts users to
install it if not (@mikemahoney218, #2172)
* `submit_cran()` now returns a more informative error when the CRAN submission
portal is down (#1958)
* `check()` gains a `vignettes` argument, to more easily disable checks for
vignettes (#2165).
* `check_win_*()` function now resets the email to the original email after
execution (@muschellij2, #2152).
* `check()` now sets `NOT_CRAN=true` by default, as was originally intended (#2135).
* `install_deps()` now supports `options("devtools.ellipsis_action")` as well
(#2169)
* `test()` now takes `stop_on_failure` as a formal argument (FALSE by default)
instead of in `...`. Its value is still passed to `testthat::test_dir` as
before (@infotroph, #2129).
* `test()` and `test_coverage_file()` gain a `export_all` argument, which
controls if all functions in a package are automatically exported (#1201).
* `dev_sitrep()` now works if run outside a package directory (#2127).
* `release()` now works if the package root is not in the working directory.
