b2be005da6
biology/bcftools: Update to 1.12 biology/samtools: Update to 1.12 Numerous enhancements, performance improvements, and bug fixes since 1.10 Minimized pkgsrc patches in all three packages Moved htslib to custom tarball since Github-generated distfiles are incomplete
58 lines
1.3 KiB
Text
58 lines
1.3 KiB
Text
@comment $NetBSD: PLIST,v 1.3 2021/03/20 18:17:07 bacon Exp $
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bin/ace2sam
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bin/blast2sam.pl
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bin/bowtie2sam.pl
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bin/export2sam.pl
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bin/fasta-sanitize.pl
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bin/interpolate_sam.pl
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bin/maq2sam-long
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bin/maq2sam-short
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bin/md5fa
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bin/md5sum-lite
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bin/novo2sam.pl
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bin/plot-ampliconstats
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bin/plot-bamstats
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bin/psl2sam.pl
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bin/sam2vcf.pl
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bin/samtools
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bin/samtools.pl
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bin/seq_cache_populate.pl
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bin/soap2sam.pl
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bin/wgsim
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bin/wgsim_eval.pl
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bin/zoom2sam.pl
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man/man1/samtools-addreplacerg.1
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man/man1/samtools-ampliconclip.1
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man/man1/samtools-ampliconstats.1
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man/man1/samtools-bedcov.1
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man/man1/samtools-calmd.1
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man/man1/samtools-cat.1
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man/man1/samtools-collate.1
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man/man1/samtools-coverage.1
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man/man1/samtools-depad.1
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man/man1/samtools-depth.1
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man/man1/samtools-dict.1
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man/man1/samtools-faidx.1
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man/man1/samtools-fasta.1
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man/man1/samtools-fastq.1
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man/man1/samtools-fixmate.1
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man/man1/samtools-flags.1
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man/man1/samtools-flagstat.1
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man/man1/samtools-fqidx.1
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man/man1/samtools-idxstats.1
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man/man1/samtools-index.1
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man/man1/samtools-markdup.1
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man/man1/samtools-merge.1
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man/man1/samtools-mpileup.1
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man/man1/samtools-phase.1
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man/man1/samtools-quickcheck.1
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man/man1/samtools-reheader.1
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man/man1/samtools-rmdup.1
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man/man1/samtools-sort.1
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man/man1/samtools-split.1
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man/man1/samtools-stats.1
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man/man1/samtools-targetcut.1
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man/man1/samtools-tview.1
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man/man1/samtools-view.1
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man/man1/samtools.1
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man/man1/wgsim.1
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