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rillig 84f2203288 all: migrate some SourceForge homepage URLs back from https to http 
https://mail-index.netbsd.org/pkgsrc-changes/2020/01/18/msg205146.html

In the above commit, the homepage URLs were migrated from http to https,
assuming that SourceForge would use the same host names for both http and
https connections. This assumption was wrong. Their documentation at
https://sourceforge.net/p/forge/documentation/Custom%20VHOSTs/ states
that the https URLs use the domain sourceforge.io instead.

To make the homepages from the above commit reachable again, pkglint has
been extended to check for reachable homepages. This check is only
enabled when the --network command line option is given.

Each of the homepages that referred to https://$project.sourceforge.net
before was migrated to https://$project.sourceforge.io (27), and if that
was not reachable, to the fallback URL http://$project.sourceforge.net
(163).
2020-01-26 05:26:08 +00:00
..
arka
azara Switch packages using GLUT to FreeGLUT. 2019-08-30 17:01:32 +00:00
bcftools all: migrate several HOMEPAGEs to https 2020-01-18 23:30:05 +00:00
bioperl biology: align variable assignments 2019-11-02 22:09:00 +00:00
bodr Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
bwa all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
canu *: Recursive revbump from devel/boost-libs 2020-01-12 20:19:52 +00:00
cdhit Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
chemical-mime-data chemical-mime-data: comment out dead sites 2017-12-24 09:42:12 +00:00
chemtool chemtool: Mark as PaX mprotect unsafe to prevent segfault 2020-01-11 04:04:41 +00:00
clustalw Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
coalesce Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
fastDNAml
fastp biology/fastp: import fastp-0.20.0 2019-05-04 16:15:25 +00:00
fluctuate Comment out some dead HOMEPAGEs. 2017-08-01 17:40:08 +00:00
gabedit all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
genesplicer
glimmer Sort PLIST files. 2018-01-01 22:29:15 +00:00
gnome-chemistry-utils all: migrate several HOMEPAGEs to https 2020-01-18 23:30:05 +00:00
gp
gromacs biology: align variable assignments 2019-11-02 22:09:00 +00:00
hisat2 Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
hmmer Convert all occurrences (353 by my count) of 2017-01-19 18:52:01 +00:00
htslib *: Recursive revision bump for openssl 1.1.1. 2020-01-18 21:48:19 +00:00
kallisto biology/kallisto: Switch from archivers/szip to archivers/libaec 2019-05-01 12:38:54 +00:00
lucy all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
mopac
mpqc biology: align variable assignments 2019-11-02 22:09:00 +00:00
mummer all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
ncbi-blast+ biology: align variable assignments 2019-11-02 22:09:00 +00:00
nut all: migrate some SourceForge homepage URLs back from https to http 2020-01-26 05:26:08 +00:00
openbabel openbabel: Fix pkg-config .pc file 2019-11-20 18:07:55 +00:00
p5-Bio-ASN1-EntrezGene Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
pdbalign
phylip biology: align variable assignments 2019-11-02 22:09:00 +00:00
plink Multiple packages: Replace obsolete maintainer email 2019-01-13 22:06:42 +00:00
plinkseq Multiple packages: Replace obsolete maintainer email 2019-01-13 22:06:42 +00:00
primer3 all: migrate several HOMEPAGEs to https 2020-01-18 23:30:05 +00:00
profit Moved documentation to share/doc/${PKGBASE}. Bumped PKGREVISION. 2016-07-24 21:11:52 +00:00
puzzle biology: align variable assignments 2019-11-02 22:09:00 +00:00
py-biopython Add the biopython license to DEFAULT_ACCEPTABLE_LICENSES. 2019-08-14 18:12:00 +00:00
py-mol Changed PYTHON_VERSIONS_INCOMPATIBLE to PYTHON_VERSIONS_ACCEPTED; needed for future Python 3.8 2019-09-02 13:19:35 +00:00
py-pydicom py-pydicom: Update to 1.3.0 2019-10-01 14:45:29 +00:00
rasmol
samtools Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
sewer Sort PLIST files. 2018-01-01 22:29:15 +00:00
stacks Bump PKGREVISIONs for perl 5.30.0 2019-08-11 13:17:48 +00:00
stride Comment out dead sites. 2017-09-04 18:00:49 +00:00
trimmomatic biology/trimmomatic: import Trimmomatic-0.38 2018-07-25 15:14:32 +00:00
vsearch biology/vsearch: Upgrade to 2.13.4 2019-05-11 14:27:18 +00:00
xylem xylem: build fix 2018-09-29 12:49:55 +00:00
Makefile py-biopython: initial commit 2019-08-09 21:52:34 +00:00