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1883 commits

Author SHA1 Message Date
Ricardo Wurmus
126a4b6c9d
gnu: r-chipseq: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-chipseq): Update to 1.44.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
cd7c1e2c3e
gnu: r-chipseeker: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-chipseeker): Update to 1.30.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
395e9ab420
gnu: r-category: Update to 2.60.0.
* gnu/packages/bioconductor.scm (r-category): Update to 2.60.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
a6b83bd30d
gnu: r-bsgenome: Update to 1.62.0.
* gnu/packages/bioconductor.scm (r-bsgenome): Update to 1.62.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
eea602cdbb
gnu: r-biovizbase: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-biovizbase): Update to 1.42.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
7851f7f2c6
gnu: r-biostrings: Update to 2.62.0.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.62.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
d0ceaf62fc
gnu: r-biomart: Update to 2.50.0.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.50.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
918c08e20d
gnu: r-biobase: Update to 2.54.0.
* gnu/packages/bioconductor.scm (r-biobase): Update to 2.54.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
e606add2e4
gnu: r-bamsignals: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-bamsignals): Update to 1.26.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
9efb70c077
gnu: r-aroma-light: Update to 3.24.0.
* gnu/packages/bioconductor.scm (r-aroma-light): Update to 3.24.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
7f291d0965
gnu: r-annotationhub: Update to 3.2.0.
* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.2.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
c46f294350
gnu: r-annotationforge: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.36.0.
2021-11-07 22:34:37 +00:00
Ricardo Wurmus
0e31c0034a
gnu: r-annotationfilter: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-annotationfilter): Update to 1.18.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
eccd328684
gnu: r-annotationdbi: Update to 1.56.1.
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.56.1.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
eee1bc786a
gnu: r-annotate: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-annotate): Update to 1.72.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
5b63db8f83
gnu: r-affxparser: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-affxparser): Update to 1.66.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
5de927226c
gnu: r-affyio: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-affyio): Update to 1.64.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
5ab6e9e100
gnu: r-affycoretools: Update to 1.66.0.
* gnu/packages/bioconductor.scm (r-affycoretools): Update to 1.66.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
21b5db3f1e
gnu: r-affycontam: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-affycontam): Update to 1.52.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
71f58a16ae
gnu: r-affycompatible: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-affycompatible): Update to 1.54.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
a610856e88
gnu: r-affycomp: Update to 1.70.0.
* gnu/packages/bioconductor.scm (r-affycomp): Update to 1.70.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
1a4e10d555
gnu: r-affy: Update to 1.72.0.
* gnu/packages/bioconductor.scm (r-affy): Update to 1.72.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
a85e744c3d
gnu: r-iranges: Update to 2.28.0.
* gnu/packages/bioconductor.scm (r-iranges): Update to 2.28.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
1acf3f1821
gnu: r-ideoviz: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-ideoviz): Update to 1.30.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
b0a2fc9253
gnu: r-bluster: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-bluster): Update to 1.4.0.
2021-11-07 22:34:36 +00:00
Ricardo Wurmus
35ccf99fff
gnu: r-delayedarray: Update to 0.20.0.
* gnu/packages/bioconductor.scm (r-delayedarray): Update to 0.20.0.
2021-11-07 22:34:35 +00:00
Ricardo Wurmus
7cc053eaca
gnu: r-deepsnv: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-deepsnv): Update to 1.40.0.
2021-11-07 22:34:35 +00:00
Ricardo Wurmus
628a8f8c78
gnu: r-decipher: Update to 2.22.0.
* gnu/packages/bioconductor.scm (r-decipher): Update to 2.22.0.
2021-11-07 22:34:35 +00:00
Ricardo Wurmus
07b14e81f9
gnu: r-cummerbund: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-cummerbund): Update to 2.36.0.
2021-11-07 22:34:35 +00:00
Ricardo Wurmus
9d51c1f423
gnu: r-coverageview: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-coverageview): Update to 1.32.0.
2021-11-07 22:34:35 +00:00
Ricardo Wurmus
3622390699
gnu: r-biocgenerics: Update to 0.40.0.
* gnu/packages/bioconductor.scm (r-biocgenerics): Update to 0.40.0.
2021-11-07 22:34:35 +00:00
Ricardo Wurmus
6ed26516bf
gnu: r-biocversion: Update to 3.14.0.
* gnu/packages/bioconductor.scm (r-biocversion): Update to 3.14.0.
2021-11-07 22:34:35 +00:00
Ricardo Wurmus
fc0fa7a431
gnu: r-aneufinder: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-aneufinder): Update to 1.22.0.
2021-11-07 22:34:35 +00:00
Ricardo Wurmus
d1c79f5a2c
gnu: r-biocparallel: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.28.0.
[arguments]: Adjust build phase to patch renamed file.
2021-11-07 22:34:35 +00:00
Ricardo Wurmus
4a92ab58f6
gnu: Add r-msfeatures.
* gnu/packages/bioconductor.scm (r-msfeatures): New variable.
2021-11-07 22:34:34 +00:00
Ricardo Wurmus
fdb9a02a68
gnu: r-s4vectors: Update to 0.30.2.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.30.2.
2021-11-03 21:07:30 +00:00
Ricardo Wurmus
81dad9f62d
gnu: r-multidataset: Update to 1.20.2.
* gnu/packages/bioconductor.scm (r-multidataset): Update to 1.20.2.
2021-11-03 21:07:30 +00:00
Ricardo Wurmus
c00ca981a9
gnu: r-motifstack: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-motifstack): Update to 1.36.1.
2021-11-03 21:07:30 +00:00
Ricardo Wurmus
a6f270b7af
gnu: r-enrichplot: Update to 1.12.3.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.12.3.
2021-11-03 21:07:30 +00:00
Ricardo Wurmus
11cf6d399c
gnu: r-dose: Update to 3.18.3.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.3.
2021-11-03 21:07:29 +00:00
Ricardo Wurmus
b4888a5581
gnu: r-genefilter: Update to 1.74.1.
* gnu/packages/bioconductor.scm (r-genefilter): Update to 1.74.1.
2021-11-03 21:07:29 +00:00
Ricardo Wurmus
218912f6ad
gnu: r-annotationhub: Update to 3.0.2.
* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.0.2.
2021-11-03 21:07:29 +00:00
Ricardo Wurmus
0bb9c9a723
gnu: r-annotationforge: Update to 1.34.1.
* gnu/packages/bioconductor.scm (r-annotationforge): Update to 1.34.1.
2021-11-03 21:07:29 +00:00
Ricardo Wurmus
3c3d7f0410
gnu: r-biocthis: Set HOME variable.
* gnu/packages/bioconductor.scm (r-biocthis)[arguments]: Add build phase
'set-HOME.
2021-11-03 21:07:29 +00:00
Mădălin Ionel Patrașcu
4f9f2539f3
gnu: Add r-zellkonverter.
* gnu/packages/bioconductor.scm (r-zellkonverter): New variable.

Signed-off-by: Ricardo Wurmus <rekado@elephly.net>
2021-11-03 21:07:29 +00:00
Ricardo Wurmus
095b76c254
gnu: r-interval: Update to 1.1-0.8.
* gnu/packages/bioconductor.scm (r-interval): Update to 1.1-0.8.
2021-11-03 21:07:15 +00:00
Ricardo Wurmus
ac327cc7fc
gnu: Add r-fcscan.
* gnu/packages/bioconductor.scm (r-fcscan): New variable.
2021-10-21 10:59:16 +00:00
Ricardo Wurmus
b28cd884b8
gnu: r-gdsfmt: Adjust bad substitution.
* gnu/packages/bioconductor.scm (r-gdsfmt)[source]: Include beginning-of-line
anchor in substitution regular expression.
2021-09-30 12:39:49 +02:00
Ricardo Wurmus
0398a89fa1
gnu: r-delayedmatrixstats: Update to 1.14.3.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.3.
2021-09-30 12:39:49 +02:00
Ricardo Wurmus
425c53b568
gnu: r-s4vectors: Update to 0.30.1.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.30.1.
2021-09-30 12:39:49 +02:00