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1883 commits

Author SHA1 Message Date
Ricardo Wurmus
b2316605e2
gnu: r-scuttle: Update to 1.2.1.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.2.1.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
2897ad3178
gnu: r-beachmat: Update to 2.8.1.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.8.1.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
da7e7c9de8
gnu: r-biocset: Update to 1.6.1.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.6.1.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
9ff9a4756d
gnu: r-universalmotif: Update to 1.10.2.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.10.2.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
0022f40462
gnu: r-clusterprofiler: Update to 4.0.4.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.4.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
5543456ae9
gnu: r-dose: Update to 3.18.2.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.2.
2021-08-24 12:28:13 +02:00
Ricardo Wurmus
1c23b99a3c
gnu: r-batchelor: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-batchelor): Update to 1.8.1.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
82d6774757
gnu: r-ggtree: Update to 3.0.3.
* gnu/packages/bioconductor.scm (r-ggtree): Update to 3.0.3.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
e4ad91eb3e
gnu: r-treeio: Update to 1.16.2.
* gnu/packages/bioconductor.scm (r-treeio): Update to 1.16.2.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
917f0def66
gnu: r-matrixgenerics: Update to 1.4.2.
* gnu/packages/bioconductor.scm (r-matrixgenerics): Update to 1.4.2.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
3ef4c12a49
gnu: r-chippeakanno: Update to 3.26.3.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.3.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
33fedd371a
gnu: r-diffbind: Update to 3.2.5.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.5.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
514454cc8f
gnu: r-structuralvariantannotation: Update to 1.8.2.
* gnu/packages/bioconductor.scm (r-structuralvariantannotation): Update to 1.8.2.
[propagated-inputs]: Add r-genomeinfodb, r-iranges, r-s4vectors, and
r-summarizedexperiment.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
1920e567a7
gnu: r-rtracklayer: Update to 1.52.1.
* gnu/packages/bioconductor.scm (r-rtracklayer): Update to 1.52.1.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
495c50c68d
gnu: r-limma: Update to 3.48.3.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.48.3.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
3277c4e749
gnu: r-genomicfeatures: Update to 1.44.1.
* gnu/packages/bioconductor.scm (r-genomicfeatures): Update to 1.44.1.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
8df84bedf7
gnu: r-ensembldb: Update to 2.16.4.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.4.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
e46cf457bb
gnu: r-biostrings: Update to 2.60.2.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.60.2.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
227579e84a
gnu: r-biomart: Update to 2.48.3.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.3.
2021-08-24 12:28:12 +02:00
Ricardo Wurmus
1aceb93a6f
gnu: r-ldblock: Update to 1.22.1.
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.22.1.
2021-08-04 16:21:17 +02:00
Ricardo Wurmus
5909dd9e8e
gnu: r-roc: Update to 1.68.1.
* gnu/packages/bioconductor.scm (r-roc): Update to 1.68.1.
2021-08-04 16:21:16 +02:00
Ricardo Wurmus
b94c750e01
gnu: r-mixomics: Update to 6.16.3.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.3.
2021-08-04 16:21:16 +02:00
Ricardo Wurmus
6da8e99c9c
gnu: r-gosemsim: Update to 2.18.1.
* gnu/packages/bioconductor.scm (r-gosemsim): Update to 2.18.1.
2021-08-04 16:21:12 +02:00
Ricardo Wurmus
75ec0fa243
gnu: Add r-tximeta.
* gnu/packages/bioconductor.scm (r-tximeta): New variable.
2021-08-04 13:04:04 +02:00
Ricardo Wurmus
ffb381856d
gnu: r-xcms: Update to 3.14.1.
* gnu/packages/bioconductor.scm (r-xcms): Update to 3.14.1.
2021-07-29 20:20:18 +02:00
Ricardo Wurmus
e06beb503c
gnu: r-reportingtools: Update to 2.32.1.
* gnu/packages/bioconductor.scm (r-reportingtools): Update to 2.32.1.
2021-07-29 20:20:15 +02:00
Ricardo Wurmus
a32241fcda
gnu: r-catalyst: Update to 1.16.2.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.2.
2021-07-28 22:26:56 +02:00
Ricardo Wurmus
9d7eb480f8
gnu: r-mixomics: Update to 6.16.2.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.2.
2021-07-28 22:26:56 +02:00
Ricardo Wurmus
d0d3637c92
gnu: r-rsubread: Update to 2.6.4.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.6.4.
2021-07-28 22:26:56 +02:00
Ricardo Wurmus
8d9626dd7d
gnu: r-annotatr: Update to 1.18.1.
* gnu/packages/bioconductor.scm (r-annotatr): Update to 1.18.1.
2021-07-28 22:26:56 +02:00
Ricardo Wurmus
73fa220b43
gnu: r-motifbreakr: Update to 2.6.1.
* gnu/packages/bioconductor.scm (r-motifbreakr): Update to 2.6.1.
2021-07-28 22:26:55 +02:00
Ricardo Wurmus
336b110f69
gnu: r-scone: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-scone): Update to 1.16.1.
2021-07-28 22:26:55 +02:00
Ricardo Wurmus
fd0851ee97
gnu: r-chippeakanno: Update to 3.26.2.
* gnu/packages/bioconductor.scm (r-chippeakanno): Update to 3.26.2.
2021-07-28 22:26:55 +02:00
Ricardo Wurmus
acc62073be
gnu: r-ensembldb: Update to 2.16.3.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.3.
2021-07-28 22:26:55 +02:00
Tobias Geerinckx-Rice
5079aa2afd
gnu: r-structuralvariantannotation: Update to 1.8.1.
The previous 1.8.0 source tarball has vanished.

* gnu/packages/bioconductor.scm (r-structuralvariantannotation):
Update to 1.8.1.
[propagated-inputs]: Add r-genomicfeatures.
2021-07-25 19:39:11 +02:00
Ricardo Wurmus
4140b66837
gnu: r-gviz: Update to 1.36.2.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.36.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
564142d25e
gnu: r-catalyst: Update to 1.16.1.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.1.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
c4ffceb0c2
gnu: r-rhdf5lib: Update to 1.14.2.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.14.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
e957d6c93b
gnu: r-bioconcotk: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.12.1.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
1cbcf54204
gnu: r-biocstyle: Update to 2.20.2.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.20.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
23abd7b6b6
gnu: r-mixomics: Update to 6.16.1.
* gnu/packages/bioconductor.scm (r-mixomics): Update to 6.16.1.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
3d539883ca
gnu: r-rsubread: Update to 2.6.3.
* gnu/packages/bioconductor.scm (r-rsubread): Update to 2.6.3.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
a94d1e3b4c
gnu: r-annaffy: Update to 1.64.2.
* gnu/packages/bioconductor.scm (r-annaffy): Update to 1.64.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
344c901a4c
gnu: r-clusterprofiler: Update to 4.0.2.
* gnu/packages/bioconductor.scm (r-clusterprofiler): Update to 4.0.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
a5e6826020
gnu: r-enrichplot: Update to 1.12.2.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.12.2.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
209642912d
gnu: r-dose: Update to 3.18.1.
* gnu/packages/bioconductor.scm (r-dose): Update to 3.18.1.
2021-07-10 21:35:29 +02:00
Ricardo Wurmus
072533f579
gnu: r-diffbind: Update to 3.2.4.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.4.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
9496f34e23
gnu: r-systempiper: Update to 1.26.3.
* gnu/packages/bioconductor.scm (r-systempiper): Update to 1.26.3.
[propagated-inputs]: Add r-crayon and r-s4vectors.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
ea52ad7d4f
gnu: r-mzr: Update to 2.26.1.
* gnu/packages/bioconductor.scm (r-mzr): Update to 2.26.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
8936e45327
gnu: r-limma: Update to 3.48.1.
* gnu/packages/bioconductor.scm (r-limma): Update to 3.48.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
dfe8e5cca6
gnu: r-genomeinfodb: Update to 1.28.1.
* gnu/packages/bioconductor.scm (r-genomeinfodb): Update to 1.28.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
fd00ed8ff8
gnu: r-ensembldb: Update to 2.16.2.
* gnu/packages/bioconductor.scm (r-ensembldb): Update to 2.16.2.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
3c60e8d5e5
gnu: r-edaseq: Update to 2.26.1.
* gnu/packages/bioconductor.scm (r-edaseq): Update to 2.26.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
f8d7d07679
gnu: r-biocparallel: Update to 1.26.1.
* gnu/packages/bioconductor.scm (r-biocparallel): Update to 1.26.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
03c9d86432
gnu: r-biomart: Update to 2.48.2.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.2.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
74bfaf92db
gnu: r-annotationhub: Update to 3.0.1.
* gnu/packages/bioconductor.scm (r-annotationhub): Update to 3.0.1.
2021-07-10 21:35:28 +02:00
Ricardo Wurmus
4aa90cb4b3
gnu: Add r-cistopic-next.
* gnu/packages/bioconductor.scm (r-cistopic-next): New variable.
2021-06-29 12:28:44 +02:00
Ricardo Wurmus
4fb2b5cef8
gnu: r-cistopic: Update to 2.1.0.
* gnu/packages/bioconductor.scm (r-cistopic): Update to 2.1.0.
2021-06-28 19:23:49 +02:00
Ricardo Wurmus
c44271445a
gnu: r-monocle3: Update to 1.0.0.
* gnu/packages/bioconductor.scm (r-monocle3): Update to 1.0.0.
[propagated-inputs]: Add r-batchelor, r-leidenbase, and r-rsample.
2021-06-21 17:53:26 +02:00
Ricardo Wurmus
7209beb694
gnu: Add r-leidenbase.
* gnu/packages/bioconductor.scm (r-leidenbase): New variable.
2021-06-21 17:53:26 +02:00
Ricardo Wurmus
a41bddd29d
gnu: Add r-batchelor.
* gnu/packages/bioconductor.scm (r-batchelor): New variable.
2021-06-21 17:53:26 +02:00
Ricardo Wurmus
278e1c090e
gnu: Add r-residualmatrix.
* gnu/packages/bioconductor.scm (r-residualmatrix): New variable.
2021-06-21 17:53:26 +02:00
Ricardo Wurmus
111aa862ec
gnu: r-monocle3: Add missing input.
* gnu/packages/bioconductor.scm (r-monocle3)[propagated-inputs]: Add
r-assertthat.
2021-06-21 17:53:25 +02:00
Ricardo Wurmus
ef5468ff0e
gnu: Add r-chicago.
* gnu/packages/bioconductor.scm (r-chicago): New variable.
2021-06-17 14:57:47 +02:00
Ricardo Wurmus
88d8b4ece0
gnu: r-gviz: Update to 1.36.1.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.36.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
45f1e079a5
gnu: r-scater: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.20.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
06fb533c28
gnu: r-rhdf5lib: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-rhdf5lib): Update to 1.14.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
e4c2155263
gnu: r-biocstyle: Update to 2.20.1.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.20.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
46178051d5
gnu: r-enrichplot: Update to 1.12.1.
* gnu/packages/bioconductor.scm (r-enrichplot): Update to 1.12.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
c5b7ade1c6
gnu: r-biocsingular: Update to 1.8.1.
* gnu/packages/bioconductor.scm (r-biocsingular): Update to 1.8.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
79b67d2f54
gnu: r-diffbind: Update to 3.2.2.
* gnu/packages/bioconductor.scm (r-diffbind): Update to 3.2.2.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
005d3d4058
gnu: r-biostrings: Update to 2.60.1.
* gnu/packages/bioconductor.scm (r-biostrings): Update to 2.60.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
495a9cff6d
gnu: r-biomart: Update to 2.48.1.
* gnu/packages/bioconductor.scm (r-biomart): Update to 2.48.1.
[propagated-inputs]: Add r-xml2.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
49e8978452
gnu: r-annotationdbi: Update to 1.54.1.
* gnu/packages/bioconductor.scm (r-annotationdbi): Update to 1.54.1.
2021-06-17 14:25:36 +02:00
Ricardo Wurmus
8f12002f6e
gnu: r-sushi: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-sushi): Update to 1.30.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
abe7628a05
gnu: r-guitar: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-guitar): Update to 2.8.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
3a5642d72e
gnu: r-chromstar: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-chromstar): Update to 1.18.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
3e2052e7da
gnu: r-snpstats: Update to 1.42.0.
* gnu/packages/bioconductor.scm (r-snpstats): Update to 1.42.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
8fa5a4d753
gnu: r-pathview: Update to 1.32.0.
* gnu/packages/bioconductor.scm (r-pathview): Update to 1.32.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
b4cea45e7c
gnu: r-ldblock: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-ldblock): Update to 1.22.0.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
2860208c42
gnu: r-kegggraph: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-kegggraph): Update to 1.52.0.
[propagated-inputs]: Add r-rgraphviz.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
a06d13be09
gnu: r-gwascat: Update to 2.24.0.
* gnu/packages/bioconductor.scm (r-gwascat): Update to 2.24.0.
[propagated-inputs]: Add r-annotationhub.
2021-06-05 09:12:58 +02:00
Ricardo Wurmus
bdfa1178b9
gnu: r-gviz: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-gviz): Update to 1.36.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
46b7d19dcc
gnu: r-ggbio: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-ggbio): Update to 1.40.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
bd6d0007d9
gnu: r-erma: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-erma): Update to 1.8.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
8ad54dc134
gnu: r-catalyst: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-catalyst): Update to 1.16.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
2fe8673263
gnu: r-msmstests: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-msmstests): Update to 1.30.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
e501608db3
gnu: r-msmseda: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-msmseda): Update to 1.30.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
b5a387745a
gnu: r-biocio: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-biocio): Update to 1.2.0.
[propagated-inputs]: Remove r-genomicranges and r-rcurl.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
aaf095825b
gnu: r-mscoreutils: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-mscoreutils): Update to 1.4.0.
[propagated-inputs]: Add r-clue.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
47e291df84
gnu: r-delayedmatrixstats: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-delayedmatrixstats): Update to 1.14.0.
[propagated-inputs]: Remove r-biocparallel and r-hdf5array.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
360477c202
gnu: r-sparsematrixstats: Update to 1.4.0.
* gnu/packages/bioconductor.scm (r-sparsematrixstats): Update to 1.4.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
015ba64bc0
gnu: r-scran: Update to 1.20.1.
* gnu/packages/bioconductor.scm (r-scran): Update to 1.20.1.
[propagated-inputs]: Remove r-biocneighbors; add r-metapod.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
d9755a22f6
gnu: r-scater: Update to 1.20.0.
* gnu/packages/bioconductor.scm (r-scater): Update to 1.20.0.
[propagated-inputs]: Add r-beachmat, r-rcolorbrewer, and r-rtsne.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
851894f8da
gnu: r-scuttle: Update to 1.2.0.
* gnu/packages/bioconductor.scm (r-scuttle): Update to 1.2.0.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
b21a73c00b
gnu: r-singlecellexperiment: Update to 1.14.1.
* gnu/packages/bioconductor.scm (r-singlecellexperiment): Update to 1.14.1.
[propagated-inputs]: Add r-delayedarray and r-genomicranges.
2021-06-05 09:12:57 +02:00
Ricardo Wurmus
71e392966a
gnu: r-chromvar: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-chromvar): Update to 1.14.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
56a2dcfdc7
gnu: r-motifmatchr: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-motifmatchr): Update to 1.14.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
0b6b42b6c4
gnu: r-tfbstools: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-tfbstools): Update to 1.30.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
a92a277873
gnu: r-cner: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-cner): Update to 1.28.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
370d020e88
gnu: r-beachmat: Update to 2.8.0.
* gnu/packages/bioconductor.scm (r-beachmat): Update to 2.8.0.
[propagated-inputs]: Add r-rcpp.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
dbb929bf4a
gnu: r-hitc: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-hitc): Update to 1.36.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
914bd41da9
gnu: r-fithic: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-fithic): Update to 1.18.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
64b03c66ad
gnu: r-rgraphviz: Update to 2.36.0.
* gnu/packages/bioconductor.scm (r-rgraphviz): Update to 2.36.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
5565b8bada
gnu: r-s4vectors: Update to 0.30.0.
* gnu/packages/bioconductor.scm (r-s4vectors): Update to 0.30.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
a78daaa572
gnu: r-preprocesscore: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-preprocesscore): Update to 1.54.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
a9f203ba6c
gnu: r-icens: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-icens): Update to 1.64.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
3b19239c0f
gnu: r-m3c: Update to 1.14.0.
* gnu/packages/bioconductor.scm (r-m3c): Update to 1.14.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
06dd2fd625
gnu: r-rgreat: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-rgreat): Update to 1.24.0.
2021-06-05 09:12:56 +02:00
Ricardo Wurmus
5d611d3f15
gnu: r-pcatools: Update to 2.4.0.
* gnu/packages/bioconductor.scm (r-pcatools): Update to 2.4.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
db46064043
gnu: r-biodist: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-biodist): Update to 1.64.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
36f51f8afe
gnu: r-biocworkflowtools: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-biocworkflowtools): Update to 1.18.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
e828fa21bb
gnu: r-biocset: Update to 1.6.0.
* gnu/packages/bioconductor.scm (r-biocset): Update to 1.6.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
e9e4f65dc1
gnu: r-biocpkgtools: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-biocpkgtools): Update to 1.10.1.
[propagated-inputs]: Remove r-rappdirs.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
2023951c8e
gnu: r-biocor: Update to 1.16.0.
* gnu/packages/bioconductor.scm (r-biocor): Update to 1.16.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
4faded238e
gnu: r-bioconcotk: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-bioconcotk): Update to 1.12.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
e7b465e81b
gnu: r-multiassayexperiment: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-multiassayexperiment): Update to 1.18.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
37f824c5e7
gnu: r-grohmm: Update to 1.26.0.
* gnu/packages/bioconductor.scm (r-grohmm): Update to 1.26.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
28613e1000
gnu: r-experimenthub: Update to 2.0.0.
* gnu/packages/bioconductor.scm (r-experimenthub): Update to 2.0.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
1e2c0e824c
gnu: r-biocviews: Update to 1.60.0.
* gnu/packages/bioconductor.scm (r-biocviews): Update to 1.60.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
6513592747
gnu: r-biocstyle: Update to 2.20.0.
* gnu/packages/bioconductor.scm (r-biocstyle): Update to 2.20.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
cd9af2379d
gnu: r-biocgraph: Update to 1.54.0.
* gnu/packages/bioconductor.scm (r-biocgraph): Update to 1.54.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
834a6dbaab
gnu: r-ebarrays: Update to 2.56.0.
* gnu/packages/bioconductor.scm (r-ebarrays): Update to 2.56.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
f218b9b216
gnu: r-reactomepa: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-reactomepa): Update to 1.36.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
a95a14c0cc
gnu: r-graphite: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-graphite): Update to 1.38.0.
[native-inputs]: Add r-knitr.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
dc2878754c
gnu: r-biobroom: Update to 1.24.0.
* gnu/packages/bioconductor.scm (r-biobroom): Update to 1.24.0.
2021-06-05 09:12:55 +02:00
Ricardo Wurmus
7c990fbcb3
gnu: r-bioassayr: Update to 1.30.0.
* gnu/packages/bioconductor.scm (r-bioassayr): Update to 1.30.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
02ec364cf6
gnu: r-chemminer: Update to 3.44.0.
* gnu/packages/bioconductor.scm (r-chemminer): Update to 3.44.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
8a8f200703
gnu: r-bigpint: Update to 1.8.0.
* gnu/packages/bioconductor.scm (r-bigpint): Update to 1.8.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
90eb7ae1a9
gnu: r-biggr: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-biggr): Update to 1.28.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
302929da31
gnu: r-hyperdraw: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-hyperdraw): Update to 1.44.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
d51885812f
gnu: r-hypergraph: Update to 1.64.0.
* gnu/packages/bioconductor.scm (r-hypergraph): Update to 1.64.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
92f5efa65d
gnu: r-rsbml: Update to 2.50.0.
* gnu/packages/bioconductor.scm (r-rsbml): Update to 2.50.0.
[inputs]: Remove zlib.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
58b8ed9f08
gnu: r-bifet: Update to 1.12.0.
* gnu/packages/bioconductor.scm (r-bifet): Update to 1.12.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
49403e8241
gnu: r-bicare: Update to 1.50.0.
* gnu/packages/bioconductor.scm (r-bicare): Update to 1.50.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
3c64554bbc
gnu: r-bhc: Update to 1.44.0.
* gnu/packages/bioconductor.scm (r-bhc): Update to 1.44.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
bacd432cb1
gnu: r-bgx: Update to 1.58.0.
* gnu/packages/bioconductor.scm (r-bgx): Update to 1.58.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
51d637a32d
gnu: r-bgmix: Update to 1.52.0.
* gnu/packages/bioconductor.scm (r-bgmix): Update to 1.52.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
e4087ae9c9
gnu: r-universalmotif: Update to 1.10.1.
* gnu/packages/bioconductor.scm (r-universalmotif): Update to 1.10.1.
[propagated-inputs]: Remove r-ggseqlogo and r-rdpack.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
56ec3a6fb9
gnu: r-unifiedwmwqpcr: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-unifiedwmwqpcr): Update to 1.28.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
58f2abfbce
gnu: r-htqpcr: Update to 1.46.0.
* gnu/packages/bioconductor.scm (r-htqpcr): Update to 1.46.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
2ca9f4fe9b
gnu: r-variancepartition: Update to 1.22.0.
* gnu/packages/bioconductor.scm (r-variancepartition): Update to 1.22.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
27e06000b1
gnu: r-variantfiltering: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-variantfiltering): Update to 1.28.0.
2021-06-05 09:12:54 +02:00
Ricardo Wurmus
7a287bc670
gnu: r-timeseriesexperiment: Update to 1.10.0.
* gnu/packages/bioconductor.scm (r-timeseriesexperiment): Update to 1.10.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
99496a17f5
gnu: r-wavcluster: Update to 2.26.0.
* gnu/packages/bioconductor.scm (r-wavcluster): Update to 2.26.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
66e45a9f1f
gnu: r-reqon: Update to 1.38.0.
* gnu/packages/bioconductor.scm (r-reqon): Update to 1.38.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
0615d394c9
gnu: r-seqbias: Update to 1.40.0.
* gnu/packages/bioconductor.scm (r-seqbias): Update to 1.40.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
988337d87b
gnu: r-bigmelon: Update to 1.18.0.
* gnu/packages/bioconductor.scm (r-bigmelon): Update to 1.18.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
0cc4deb017
gnu: r-gdsfmt: Update to 1.28.0.
* gnu/packages/bioconductor.scm (r-gdsfmt): Update to 1.28.0.
2021-06-05 09:12:53 +02:00
Ricardo Wurmus
d0c36449d2
gnu: r-watermelon: Update to 1.36.0.
* gnu/packages/bioconductor.scm (r-watermelon): Update to 1.36.0.
2021-06-05 09:12:53 +02:00