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37 commits

Author SHA1 Message Date
Wen Heping
8c8dc2d005 - Update to 3.1b2 
- Pass maintainership to submitter

PR:		223561
Submitted by:	mzaki@niid.go.jp
Approved by:	bacon4000@gmail.com(previous maintainer)
 2017-11-11 12:51:52 +00:00
Baptiste Daroussin
97c03e9174 Remove dead master sites 2017-10-13 11:14:32 +00:00
Mark Linimon
45cb752a04 Begin deorbit burn of ia64. We have not attempted to build packages for 
it for many years.

While here, alphabetize ARCHs, pet portlint, and modernize usages.

Approved by:	portmgr (tier-2 blanket)
 2017-06-25 00:29:09 +00:00
Martin Wilke
9146c80d02 - Update maintainer mail address 
- Update/Remove MASTER_SITE

PR:		204755
Submitted by:	 jwbacon@tds.net (maintainer)
Approved by:	mat (mentor)
Differential Revision:	D4493
 2015-12-11 08:48:56 +00:00
Dmitry Marakasov
5ae457bc49 - Remove deprecated option 
- Tweak compiler flags
- Add LICENSE
- Pass maintainership to submitter

PR:		199066
Submitted by:	jwbacon@tds.net
 2015-04-02 15:41:31 +00:00
Baptiste Daroussin
99a3e8559c Cleanup plist 2014-10-20 07:10:48 +00:00
Adam Weinberger
e7e692da08 Add DOCS to OPTIONS_DEFINE to ports that check for PORT_OPTIONS:MDOCS. 
While here, use OPTIONS helpers and re-enable manpage installation.
 2014-07-15 14:54:54 +00:00
Antoine Brodin
9d9aec7824 Stage support 2013-12-30 18:08:14 +00:00
Baptiste Daroussin
7055ff02f1 Add NO_STAGE all over the place in preparation for the staging support (cat: biology) 2013-09-20 15:55:44 +00:00
Andrej Zverev
99ad912735 - Convert to new perl framework 
- Trim Makefile header
 2013-08-03 08:45:51 +00:00
Wen Heping
c65306f29b - Update to 3.0 
- Convert to optionsNG
- Drop maintainership
 2013-07-20 15:08:45 +00:00
Wen Heping
baa9b66158 - Take maintainership 2012-10-01 14:55:55 +00:00
Thomas Abthorpe
d46aafc64e - Reassign to the heap at maintainer's request 2012-10-01 14:45:16 +00:00
Martin Wilke
a9481afc8a - Get Rid MD5 support 2011-03-19 12:38:54 +00:00
Philip M. Gollucci
76b1b59c33 - Update download locations, update WWW 
Reported by:    -fetch-original pointyhat run
 2009-02-01 08:17:14 +00:00
Edwin Groothuis
acd87b4ad8 SHA256ify 
Approved by:    krion@
 2006-01-22 08:34:46 +00:00
Sergey Matveychuk
5275953004 - Remove a junk white space. 2004-11-25 22:58:29 +00:00
Sergey Matveychuk
3b19501744 - Update to 2.3.2 
- Add WITH_PVM knob
- Pass maintainership to submitter

PR:		ports/74331
Submitted by:	Fernan Aguero <fernan(at)iib.unsam.edu.ar>
 2004-11-25 22:35:52 +00:00
Mark Linimon
e22ed3d655 With portmgr hat on, reset inactive maintainer. These ports are now up 
for adoption.
 2004-11-20 08:09:49 +00:00
Trevor Johnson
8232e82f85 SIZEify (maintainer timeout) 2004-03-31 03:12:58 +00:00
Sergey A. Osokin
958842c5c6 Cosmetic fix: use %%DOCSDIR%% macro. 
No functionally changes.

Submitted by:	Oleg Karachevtsev <ok@etrust.ru>
A part of PR:	57992
 2003-10-22 09:37:18 +00:00
Ade Lovett
7e52725f2a Clear moonlight beckons. 
Requiem mors pacem pkg-comment,
And be calm ports tree.

E Nomini Patri, E Fili, E Spiritu Sancti.
 2003-03-07 06:14:21 +00:00
Johann Visagie
72f20def8c - Add patch that will, for -CURRENT only, change: -pthread -> -lc_r 
- Bump $PORTREVISION

Prompted by:	Various questions from Rune Linding <linding@EMBL-Heidelberg.DE>
 2002-07-11 10:52:14 +00:00
Johann Visagie
4e8aeac440 - Update port to version 2.2g 2001-08-22 13:18:10 +00:00
Johann Visagie
7ddb2910c6 - General clean-up of port. 
- Install PDF and HTML documentation.
- Take over maintainership.

Approved by:	Silence from previous maintainer; no objections from -ports
 2001-07-05 08:58:12 +00:00
Johann Visagie
819158bfa4 - Add %%PORTDOCS%% support to pkg-plist. 
- $INSTALL_MAN -> $INSTALL_DATA in Makefile where appropriate.

PR:		28668
Submitted by:	Patrick Li <pat@databits.net>
 2001-07-04 12:16:13 +00:00
Michael Haro
a0cb9ec98b update with the new PORTNAME/PORTVERSION variables 2000-04-08 22:04:57 +00:00
Michael Haro
6ba32b931f fix some pkg/MESSAGE stuff 2000-01-29 20:01:39 +00:00
David E. O'Brien
fe1e09a6cc Change Id->FreeBSD. 1999-08-25 04:58:03 +00:00
Tim Vanderhoek
748713c3f6 As threatened, enforce the "Capital, no period" rule. Ellipses are 
permitted.  Note that, given current numeric motif of PW, this is done
in four equally-sized commits of 393 files each.
 1999-06-26 17:19:19 +00:00
Tim Vanderhoek
c8bd4fdcd3 Weasal and Wabbits and BIG FOOT. 1999-05-02 21:38:01 +00:00
Bill Fenner
b0f9653aea Upgrade to 2.1.1 
PR:		ports/10228
Submitted by:	Michael Haro mharo@area51.fremont.ca.us
 1999-03-08 20:23:47 +00:00
Satoshi Asami
4b07f0329b Change *_DEPENDS on lang/perl5 to USE_PERL5 so we won't have any 
dependencies to perl5 in -current.  This might cause some unwanted
perl5 installations on -stable (if it was originally RUN_DEPENDS,
perl5 will now be installed during build too, etc.), but its lifetime
is limited anyway.
 1999-01-02 00:12:21 +00:00
Bill Fumerola
4f183f626d Update MASTER_SITES. 
Thanks To:	Fenner's portsurvey and ftpsearch.lycos.com
 1998-12-09 22:35:05 +00:00
Steve Price
e7efc40d5f Remove empty doc dir on deinstall. 1998-09-27 01:38:24 +00:00
David E. O'Brien
09b64b0d35 Remove manpages from pkg/PLIST 1998-08-13 21:16:00 +00:00
Steve Price
91f5c278fe Initial import of hmmer version 2.0. 
Profile hidden Markov models for biological sequence analysis.

PR:		7120
Submitted by:	Matthew Jason Euclid Barnhart <barnhart@sequencer.wustl.edu>
 1998-07-12 23:30:04 +00:00